| .editorconfig | |
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| .gitignore | |
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| .rubocop.yml | |
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| .travis.yml | |
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| .yardopts | |
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| Gemfile | |
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| Gemfile.lock | |
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| HISTORY.md | |
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| LICENSE | |
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| README.md | |
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| Rakefile | |
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| biotcm.gemspec | |
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| bm/biotcm/bm_table.rb | 46 | A 0 mins |
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| bm/biotcm/databases/bm_hgnc.rb | 19 | A 0 mins |
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| bm/bm_helper.rb | 13 | A 0 mins |
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| bm/fixtures/table_1.txt | |
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| bm/fixtures/table_2.txt | |
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| demo/yield_string_ppi.rb | 67 | A 2 hrs |
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| docs/index.html | |
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| docs/meta.yaml | |
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| lib/biotcm.rb | 41 | A 0 mins |
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| lib/biotcm/apps.rb | 5 | A 0 mins |
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| lib/biotcm/apps/gene_detector.rb | 38 | A 0 mins |
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| lib/biotcm/apps/pubmed_gene_miner.rb | 64 | A 1 hr |
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| lib/biotcm/apps/string_processor.rb | 63 | A 1 hr |
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| lib/biotcm/databases.rb | 7 | A 0 mins |
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| lib/biotcm/databases/cipher.rb | 42 | A 1 hr |
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| lib/biotcm/databases/hgnc.rb | 44 | A 45 mins |
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| lib/biotcm/databases/hgnc/converter.rb | 81 | A 3 hrs |
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| lib/biotcm/databases/hgnc/core_ext.rb | 20 | A 0 mins |
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| lib/biotcm/databases/hgnc/parser.rb | 66 | B 5 hrs |
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| lib/biotcm/databases/hgnc/rescuer.rb | 95 | C 1 day |
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| lib/biotcm/databases/kegg.rb | 116 | B 6 hrs |
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| lib/biotcm/databases/medline.rb | 89 | A 25 mins |
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| lib/biotcm/databases/medline/e_utilities.rb | 11 | A 0 mins |
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| lib/biotcm/databases/omim.rb | 38 | A 0 mins |
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| lib/biotcm/interfaces.rb | 5 | A 0 mins |
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| lib/biotcm/interfaces/interface.rb | 16 | A 0 mins |
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| lib/biotcm/interfaces/matlab.rb | 20 | A 0 mins |
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| lib/biotcm/interfaces/r.rb | 13 | A 0 mins |
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| lib/biotcm/layer.rb | 73 | B 5 hrs |
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| lib/biotcm/table.rb | 311 | D 2 days |
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| lib/biotcm/version.rb | 3 | A 0 mins |
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