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choderalab/protons

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protons/scripts/cli.py

Summary

Maintainability
A
1 hr
Test Coverage

Function validate has a Cognitive Complexity of 11 (exceeds 5 allowed). Consider refactoring.
Open

def validate(args: List[str]) -> str:
    """Validate input or return appropriate help string for the given arguments"""

    usage = (
        _logo
Severity: Minor
Found in protons/scripts/cli.py - About 1 hr to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function cli has a Cognitive Complexity of 6 (exceeds 5 allowed). Consider refactoring.
Open

def cli() -> None:
    """Command line interface for protons run script."""

    args = sys.argv
Severity: Minor
Found in protons/scripts/cli.py - About 25 mins to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

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