Yank/commands/cite.py
#!/usr/local/bin/env python
# =============================================================================================
# MODULE DOCSTRING
# =============================================================================================
"""
Print YANK citations.
"""
# =============================================================================================
# MODULE IMPORTS
# =============================================================================================
# =============================================================================================
# CITATIONS
# =============================================================================================
citations = [
"Kai Wang K, John D. Chodera, Yanzhi Yang, and Michael R. Shirts.\n"
"Identifying ligand binding sites and poses using GPU-accelerated Hamiltonian replica exchange molecular dynamics."
"\n"
"J. Comput. Aid. Mol. Des. 27:989, 2013. http://dx.doi.org/10.1007/s10822-013-9689-8",
]
# =============================================================================================
# COMMAND DISPATCH
# =============================================================================================
def dispatch(args):
print("Thank you for using YANK!")
print("")
print("Please cite the following:")
print("")
for citation in citations:
print(citation)
print("")
# TODO: Also print citations for MultiState, pymbar, and other dependencies.
return True