giuse/machine_learning_workbench

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lib/machine_learning_workbench/neural_network/base.rb

Summary

Maintainability
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Test Coverage

Assignment Branch Condition size for activate is too high. [18.28/15]
Open

    def activate input
      raise ArgumentError unless input.size == struct.first
      # load input in first state
      state[0][0...struct.first] = input
      # activate layers in sequence

This cop checks that the ABC size of methods is not higher than the configured maximum. The ABC size is based on assignments, branches (method calls), and conditions. See http://c2.com/cgi/wiki?AbcMetric

Method has too many lines. [11/10]
Open

    def load_weights weights
      raise ArgumentError unless weights.size == nweights
      weights = weights.to_na unless weights.kind_of? NArray
      from = 0
      @layers = layer_shapes.collect do |shape|

This cop checks if the length of a method exceeds some maximum value. Comment lines can optionally be ignored. The maximum allowed length is configurable.

Extra blank line detected.
Open


    ## Initialization

This cops checks for two or more consecutive blank lines.

Example:

# bad - It has two empty lines.
some_method
# one empty line
# two empty lines
some_method

# good
some_method
# one empty line
some_method

Space missing after comma.
Open

      load_weights NArray.new(nweights).rand(-1,1)

Checks for comma (,) not followed by some kind of space.

Example:

# bad
[1,2]
{ foo:bar,}

# good
[1, 2]
{ foo:bar, }

Use %i or %I for an array of symbols.
Open

    [:layer_row_sizes, :activate_layer].each do |sym|

This cop can check for array literals made up of symbols that are not using the %i() syntax.

Alternatively, it checks for symbol arrays using the %i() syntax on projects which do not want to use that syntax.

Configuration option: MinSize If set, arrays with fewer elements than this value will not trigger the cop. For example, a MinSize of3` will not enforce a style on an array of 2 or fewer elements.

Example: EnforcedStyle: percent (default)

# good
%i[foo bar baz]

# bad
[:foo, :bar, :baz]

Example: EnforcedStyle: brackets

# good
[:foo, :bar, :baz]

# bad
%i[foo bar baz]

Surrounding space missing for operator /.
Open

      -> (vec) { 1.7159 * NMath.tanh(2.0*vec/3.0) + 1e-3*vec }

Checks that operators have space around them, except for ** which should not have surrounding space.

Example:

# bad
total = 3*4
"apple"+"juice"
my_number = 38/4
a ** b

# good
total = 3 * 4
"apple" + "juice"
my_number = 38 / 4
a**b

Line is too long. [81/80]
Open

    # @return [Array<NArray>] list of NArray matrices of weights (one per layer).

Use 2 (not 3) spaces for indentation.
Open

         instance_variable_set sym, nil

This cops checks for indentation that doesn't use the specified number of spaces.

See also the IndentationConsistency cop which is the companion to this one.

Example:

# bad
class A
 def test
  puts 'hello'
 end
end

# good
class A
  def test
    puts 'hello'
  end
end

Example: IgnoredPatterns: ['^\s*module']

# bad
module A
class B
  def test
  puts 'hello'
  end
end
end

# good
module A
class B
  def test
    puts 'hello'
  end
end
end

Line is too long. [89/80]
Open

    #   @return [Array<NArray>] list of weight matrices, each uniquely describing a layer

Prefer Object#is_a? over Object#kind_of?.
Open

      weights = weights.to_na unless weights.kind_of? NArray

This cop enforces consistent use of Object#is_a? or Object#kind_of?.

Example: EnforcedStyle: is_a? (default)

# bad
var.kind_of?(Date)
var.kind_of?(Integer)

# good
var.is_a?(Date)
var.is_a?(Integer)

Example: EnforcedStyle: kind_of?

# bad
var.is_a?(Time)
var.is_a?(String)

# good
var.kind_of?(Time)
var.kind_of?(String)

Surrounding space missing for operator >.
Open

      -> (vec) { (vec>0).all? && vec || vec.class.zeros(vec.shape) }

Checks that operators have space around them, except for ** which should not have surrounding space.

Example:

# bad
total = 3*4
"apple"+"juice"
my_number = 38/4
a ** b

# good
total = 3 * 4
"apple" + "juice"
my_number = 38 / 4
a**b

Do not use spaces between -> and opening brace in lambda literals
Open

      -> (vec) { (vec>0).all? && vec || vec.class.zeros(vec.shape) }

This cop checks for spaces between -> and opening parameter brace in lambda literals.

Example: EnforcedStyle: requirenospace (default)

# bad
  a = -> (x, y) { x + y }

  # good
  a = ->(x, y) { x + y }

Example: EnforcedStyle: require_space

# bad
  a = ->(x, y) { x + y }

  # good
  a = -> (x, y) { x + y }

Use %i or %I for an array of symbols.
Open

      [:@layer_row_sizes, :@layer_col_sizes, :@nlayers, :@layer_shapes,
       :@nweights_per_layer, :@nweights].each do |sym|

This cop can check for array literals made up of symbols that are not using the %i() syntax.

Alternatively, it checks for symbol arrays using the %i() syntax on projects which do not want to use that syntax.

Configuration option: MinSize If set, arrays with fewer elements than this value will not trigger the cop. For example, a MinSize of3` will not enforce a style on an array of 2 or fewer elements.

Example: EnforcedStyle: percent (default)

# good
%i[foo bar baz]

# bad
[:foo, :bar, :baz]

Example: EnforcedStyle: brackets

# good
[:foo, :bar, :baz]

# bad
%i[foo bar baz]

Do not use spaces between -> and opening brace in lambda literals
Open

      -> (vec) { 1.7159 * NMath.tanh(2.0*vec/3.0) + 1e-3*vec }

This cop checks for spaces between -> and opening parameter brace in lambda literals.

Example: EnforcedStyle: requirenospace (default)

# bad
  a = -> (x, y) { x + y }

  # good
  a = ->(x, y) { x + y }

Example: EnforcedStyle: require_space

# bad
  a = ->(x, y) { x + y }

  # good
  a = -> (x, y) { x + y }

Surrounding space missing for operator *.
Open

      -> (vec) { 1.7159 * NMath.tanh(2.0*vec/3.0) + 1e-3*vec }

Checks that operators have space around them, except for ** which should not have surrounding space.

Example:

# bad
total = 3*4
"apple"+"juice"
my_number = 38/4
a ** b

# good
total = 3 * 4
"apple" + "juice"
my_number = 38 / 4
a**b

Line is too long. [550/80]
Open

    #   It's a list of one-dimensional matrices, each an input to a layer, plus the output layer's output. The first element is the input to the first layer of the network, which is composed of the network's input, possibly the first layer's activation on the last input (recursion), and a bias (fixed `1`). The second to but-last entries follow the same structure, but with the previous layer's output in place of the network's input. The last entry is the activation of the output layer, without additions since it's not used as an input by anyone.

Line is too long. [81/80]
Open

    # Count the layers. This is a computation helper, and for this implementation

Line is too long. [81/80]
Open

    #   all goes well there's nothing to return but a confirmation to the caller.

Use def with parentheses when there are parameters.
Open

    def nneurs nlay=nil

This cops checks for parentheses around the arguments in method definitions. Both instance and class/singleton methods are checked.

Example: EnforcedStyle: require_parentheses (default)

# The `require_parentheses` style requires method definitions
# to always use parentheses

# bad
def bar num1, num2
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

# good
def bar(num1, num2)
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

Example: EnforcedStyle: requirenoparentheses

# The `require_no_parentheses` style requires method definitions
# to never use parentheses

# bad
def bar(num1, num2)
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

# good
def bar num1, num2
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

Example: EnforcedStyle: requirenoparenthesesexceptmultiline

# The `require_no_parentheses_except_multiline` style prefers no
# parantheses when method definition arguments fit on single line,
# but prefers parantheses when arguments span multiple lines.

# bad
def bar(num1, num2)
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

# good
def bar num1, num2
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

Extra blank line detected.
Open


    ## Activation

This cops checks for two or more consecutive blank lines.

Example:

# bad - It has two empty lines.
some_method
# one empty line
# two empty lines
some_method

# good
some_method
# one empty line
some_method

Ambiguous splat operator. Parenthesize the method arguments if it's surely a splat operator, or add a whitespace to the right of the * if it should be a multiplication.
Open

        lay_w = weights[from...to].reshape *shape

This cop checks for ambiguous operators in the first argument of a method invocation without parentheses.

Example:

# bad

# The `*` is interpreted as a splat operator but it could possibly be
# a `*` method invocation (i.e. `do_something.*(some_array)`).
do_something *some_array

Example:

# good

# With parentheses, there's no ambiguity.
do_something(*some_array)

Line is too long. [83/80]
Open

      # flatter makes activation less sensitive, better with large number of inputs

Use nested module/class definitions instead of compact style.
Open

module MachineLearningWorkbench::NeuralNetwork

This cop checks the style of children definitions at classes and modules. Basically there are two different styles:

Example: EnforcedStyle: nested (default)

# good
# have each child on its own line
class Foo
  class Bar
  end
end

Example: EnforcedStyle: compact

# good
# combine definitions as much as possible
class Foo::Bar
end

The compact style is only forced for classes/modules with one child.

Surrounding space missing for operator +.
Open

        state[i+1][0...act.size] = act

Checks that operators have space around them, except for ** which should not have surrounding space.

Example:

# bad
total = 3*4
"apple"+"juice"
my_number = 38/4
a ** b

# good
total = 3 * 4
"apple" + "juice"
my_number = 38 / 4
a**b

Line is too long. [81/80]
Open

    # in the layer counts, this methods correctly ignores the input as not having

Use def with parentheses when there are parameters.
Open

    def activate input

This cops checks for parentheses around the arguments in method definitions. Both instance and class/singleton methods are checked.

Example: EnforcedStyle: require_parentheses (default)

# The `require_parentheses` style requires method definitions
# to always use parentheses

# bad
def bar num1, num2
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

# good
def bar(num1, num2)
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

Example: EnforcedStyle: requirenoparentheses

# The `require_no_parentheses` style requires method definitions
# to never use parentheses

# bad
def bar(num1, num2)
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

# good
def bar num1, num2
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

Example: EnforcedStyle: requirenoparenthesesexceptmultiline

# The `require_no_parentheses_except_multiline` style prefers no
# parantheses when method definition arguments fit on single line,
# but prefers parantheses when arguments span multiple lines.

# bad
def bar(num1, num2)
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

# good
def bar num1, num2
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

Redundant return detected.
Open

      return true

This cop checks for redundant return expressions.

Example:

def test
  return something
end

def test
  one
  two
  three
  return something
end

It should be extended to handle methods whose body is if/else or a case expression with a default branch.

Unnecessary spacing detected.
Open

        s.fill 0           # reset state to zero

This cop checks for extra/unnecessary whitespace.

Example:

# good if AllowForAlignment is true
name      = "RuboCop"
# Some comment and an empty line

website  += "/bbatsov/rubocop" unless cond
puts        "rubocop"          if     debug

# bad for any configuration
set_app("RuboCop")
website  = "https://github.com/bbatsov/rubocop"

Surrounding space missing in default value assignment.
Open

    def nneurs nlay=nil

Checks that the equals signs in parameter default assignments have or don't have surrounding space depending on configuration.

Example:

# bad
def some_method(arg1=:default, arg2=nil, arg3=[])
  # do something...
end

# good
def some_method(arg1 = :default, arg2 = nil, arg3 = [])
  # do something...
end

Redundant return detected.
Open

      return out

This cop checks for redundant return expressions.

Example:

def test
  return something
end

def test
  one
  two
  three
  return something
end

It should be extended to handle methods whose body is if/else or a case expression with a default branch.

Use def with parentheses when there are parameters.
Open

    def initialize struct, act_fn: nil, **act_fn_args

This cops checks for parentheses around the arguments in method definitions. Both instance and class/singleton methods are checked.

Example: EnforcedStyle: require_parentheses (default)

# The `require_parentheses` style requires method definitions
# to always use parentheses

# bad
def bar num1, num2
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

# good
def bar(num1, num2)
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

Example: EnforcedStyle: requirenoparentheses

# The `require_no_parentheses` style requires method definitions
# to never use parentheses

# bad
def bar(num1, num2)
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

# good
def bar num1, num2
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

Example: EnforcedStyle: requirenoparenthesesexceptmultiline

# The `require_no_parentheses_except_multiline` style prefers no
# parantheses when method definition arguments fit on single line,
# but prefers parantheses when arguments span multiple lines.

# bad
def bar(num1, num2)
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

# good
def bar num1, num2
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

Use def with parentheses when there are parameters.
Open

    def sigmoid steepness: 1

This cops checks for parentheses around the arguments in method definitions. Both instance and class/singleton methods are checked.

Example: EnforcedStyle: require_parentheses (default)

# The `require_parentheses` style requires method definitions
# to always use parentheses

# bad
def bar num1, num2
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

# good
def bar(num1, num2)
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

Example: EnforcedStyle: requirenoparentheses

# The `require_no_parentheses` style requires method definitions
# to never use parentheses

# bad
def bar(num1, num2)
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

# good
def bar num1, num2
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

Example: EnforcedStyle: requirenoparenthesesexceptmultiline

# The `require_no_parentheses_except_multiline` style prefers no
# parantheses when method definition arguments fit on single line,
# but prefers parantheses when arguments span multiple lines.

# bad
def bar(num1, num2)
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

# good
def bar num1, num2
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

Extra empty line detected at class body beginning.
Open


    # @!attribute [r] layers

This cops checks if empty lines around the bodies of classes match the configuration.

Example: EnforcedStyle: empty_lines

# good

class Foo

  def bar
    # ...
  end

end

Example: EnforcedStyle: emptylinesexcept_namespace

# good

class Foo
  class Bar

    # ...

  end
end

Example: EnforcedStyle: emptylinesspecial

# good
class Foo

  def bar; end

end

Example: EnforcedStyle: noemptylines (default)

# good

class Foo
  def bar
    # ...
  end
end

Extra blank line detected.
Open


    # @!method interface_methods

This cops checks for two or more consecutive blank lines.

Example:

# bad - It has two empty lines.
some_method
# one empty line
# two empty lines
some_method

# good
some_method
# one empty line
some_method

Surrounding space missing for operator *.
Open

      -> (vec) { 1.7159 * NMath.tanh(2.0*vec/3.0) + 1e-3*vec }

Checks that operators have space around them, except for ** which should not have surrounding space.

Example:

# bad
total = 3*4
"apple"+"juice"
my_number = 38/4
a ** b

# good
total = 3 * 4
"apple" + "juice"
my_number = 38 / 4
a**b

Do not use spaces between -> and opening brace in lambda literals
Open

      -> (vec) { 1.0 / (NMath.exp(-steepness * vec) + 1.0) }

This cop checks for spaces between -> and opening parameter brace in lambda literals.

Example: EnforcedStyle: requirenospace (default)

# bad
  a = -> (x, y) { x + y }

  # good
  a = ->(x, y) { x + y }

Example: EnforcedStyle: require_space

# bad
  a = ->(x, y) { x + y }

  # good
  a = -> (x, y) { x + y }

Line is too long. [106/80]
Open

    # @return [Integer] the number of neurons in a given layer, or in all network, or the number of inputs

Use def with parentheses when there are parameters.
Open

    def load_weights weights

This cops checks for parentheses around the arguments in method definitions. Both instance and class/singleton methods are checked.

Example: EnforcedStyle: require_parentheses (default)

# The `require_parentheses` style requires method definitions
# to always use parentheses

# bad
def bar num1, num2
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

# good
def bar(num1, num2)
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

Example: EnforcedStyle: requirenoparentheses

# The `require_no_parentheses` style requires method definitions
# to never use parentheses

# bad
def bar(num1, num2)
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

# good
def bar num1, num2
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

Example: EnforcedStyle: requirenoparenthesesexceptmultiline

# The `require_no_parentheses_except_multiline` style prefers no
# parantheses when method definition arguments fit on single line,
# but prefers parantheses when arguments span multiple lines.

# bad
def bar(num1, num2)
  num1 + num2
end

def foo descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name
  do_something
end

# good
def bar num1, num2
  num1 + num2
end

def foo(descriptive_var_name,
        another_descriptive_var_name,
        last_descriptive_var_name)
  do_something
end

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