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projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py

Summary

Maintainability
B
4 hrs
Test Coverage

File scenarios-exploration-asymmetric-n_nodes=1000.py has 253 lines of code (exceeds 250 allowed). Consider refactoring.
Open

# Explore the effect of overlap size in slicing embeddings for scenarios having different network-feature correlation

##
## Imports and setup
##
Severity: Minor
Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py - About 2 hrs to fix

    Function make_train_vae has 6 arguments (exceeds 4 allowed). Consider refactoring.
    Open

    def make_train_vae(dims, q_overlap, p_ξ_slices, skey, with_progress=True):
    Severity: Minor
    Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py - About 45 mins to fix

      Avoid deeply nested control flow statements.
      Open

                      for model_type in tqdm([MODEL_OVERLAP, MODEL_NOOVERLAP]):
                    if model_type == MODEL_OVERLAP:
                        dim_ξ_adj = dim_ξ_ov_adj
                        dim_ξ_v = dim_ξ_ov_v
                        q_overlap = ov
      Severity: Major
      Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py - About 45 mins to fix

        Function make_vae has 5 arguments (exceeds 4 allowed). Consider refactoring.
        Open

        def make_vae(n_nodes, dims, q_overlap, p_ξ_slices):
        Severity: Minor
        Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py - About 35 mins to fix

          Function train has 5 arguments (exceeds 4 allowed). Consider refactoring.
          Open

          def train(model, A, labels, features, with_progress=True):
          Severity: Minor
          Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py - About 35 mins to fix

            Too many leading '#' for block comment
            Open

            ## Creating the scenarios
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate inline comments by at least two spaces.

            An inline comment is a comment on the same line as a statement.
Inline comments should be separated by at least two spaces from the
statement. They should start with a # and a single space.

Each line of a block comment starts with a # and a single space
(unless it is indented text inside the comment).

Okay: x = x + 1  # Increment x
Okay: x = x + 1    # Increment x
Okay: # Block comment
E261: x = x + 1 # Increment x
E262: x = x + 1  #Increment x
E262: x = x + 1  #  Increment x
E265: #Block comment
E266: ### Block comment

            Line too long (94 > 79 characters)
            Open

                     + (.13 - π_gap) * (np.ones((n_clusters, n_clusters)) - np.diag(np.ones(n_clusters))))
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (91 > 79 characters)
            Open

                    # used behind the scenes by Model.predict_minibatches() and Model.fit_minibatches()
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Expected 2 blank lines, found 1
            Open

            def train(model, A, labels, features, with_progress=True):
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate top-level function and class definitions with two blank lines.

            Method definitions inside a class are separated by a single blank
line.

Extra blank lines may be used (sparingly) to separate groups of
related functions.  Blank lines may be omitted between a bunch of
related one-liners (e.g. a set of dummy implementations).

Use blank lines in functions, sparingly, to indicate logical
sections.

Okay: def a():\n    pass\n\n\ndef b():\n    pass
Okay: def a():\n    pass\n\n\nasync def b():\n    pass
Okay: def a():\n    pass\n\n\n# Foo\n# Bar\n\ndef b():\n    pass
Okay: default = 1\nfoo = 1
Okay: classify = 1\nfoo = 1

E301: class Foo:\n    b = 0\n    def bar():\n        pass
E302: def a():\n    pass\n\ndef b(n):\n    pass
E302: def a():\n    pass\n\nasync def b(n):\n    pass
E303: def a():\n    pass\n\n\n\ndef b(n):\n    pass
E303: def a():\n\n\n\n    pass
E304: @decorator\n\ndef a():\n    pass
E305: def a():\n    pass\na()
E306: def a():\n    def b():\n        pass\n    def c():\n        pass

            Line too long (99 > 79 characters)
            Open

                # which might use memory. I know, it's an open issue on GitHub, but it's not a problem for now.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Expected 2 blank lines after class or function definition, found 1
            Open

            submitted = {}
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate top-level function and class definitions with two blank lines.

            Method definitions inside a class are separated by a single blank
line.

Extra blank lines may be used (sparingly) to separate groups of
related functions.  Blank lines may be omitted between a bunch of
related one-liners (e.g. a set of dummy implementations).

Use blank lines in functions, sparingly, to indicate logical
sections.

Okay: def a():\n    pass\n\n\ndef b():\n    pass
Okay: def a():\n    pass\n\n\nasync def b():\n    pass
Okay: def a():\n    pass\n\n\n# Foo\n# Bar\n\ndef b():\n    pass
Okay: default = 1\nfoo = 1
Okay: classify = 1\nfoo = 1

E301: class Foo:\n    b = 0\n    def bar():\n        pass
E302: def a():\n    pass\n\ndef b(n):\n    pass
E302: def a():\n    pass\n\nasync def b(n):\n    pass
E303: def a():\n    pass\n\n\n\ndef b(n):\n    pass
E303: def a():\n\n\n\n    pass
E304: @decorator\n\ndef a():\n    pass
E305: def a():\n    pass\na()
E306: def a():\n    def b():\n        pass\n    def c():\n        pass

            Expected 2 blank lines, found 1
            Open

            def scenario_from_aid_cid(aid, cid, n_nodes=N_NODES, n_clusters=N_CLUSTERS):
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate top-level function and class definitions with two blank lines.

            Method definitions inside a class are separated by a single blank
line.

Extra blank lines may be used (sparingly) to separate groups of
related functions.  Blank lines may be omitted between a bunch of
related one-liners (e.g. a set of dummy implementations).

Use blank lines in functions, sparingly, to indicate logical
sections.

Okay: def a():\n    pass\n\n\ndef b():\n    pass
Okay: def a():\n    pass\n\n\nasync def b():\n    pass
Okay: def a():\n    pass\n\n\n# Foo\n# Bar\n\ndef b():\n    pass
Okay: default = 1\nfoo = 1
Okay: classify = 1\nfoo = 1

E301: class Foo:\n    b = 0\n    def bar():\n        pass
E302: def a():\n    pass\n\ndef b(n):\n    pass
E302: def a():\n    pass\n\nasync def b(n):\n    pass
E303: def a():\n    pass\n\n\n\ndef b(n):\n    pass
E303: def a():\n\n\n\n    pass
E304: @decorator\n\ndef a():\n    pass
E305: def a():\n    pass\na()
E306: def a():\n    def b():\n        pass\n    def c():\n        pass

            Line too long (110 > 79 characters)
            Open

                For non-binary features, we use a Gaussian distribution for feature prediction, so the output for features
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (106 > 79 characters)
            Open

                    # item defines the input to feature decoding. In this case they overlap with `overlap` dimensions.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (98 > 79 characters)
            Open

                    In the fullbatch setting all this is constant and equal to the values of the full dataset.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (90 > 79 characters)
            Open

                    # are picklable, so travel without problem across processes and across the network
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Too many leading '#' for block comment
            Open

            ## Build the VAEs
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate inline comments by at least two spaces.

            An inline comment is a comment on the same line as a statement.
Inline comments should be separated by at least two spaces from the
statement. They should start with a # and a single space.

Each line of a block comment starts with a # and a single space
(unless it is indented text inside the comment).

Okay: x = x + 1  # Increment x
Okay: x = x + 1    # Increment x
Okay: # Block comment
E261: x = x + 1 # Increment x
E262: x = x + 1  #Increment x
E262: x = x + 1  #  Increment x
E265: #Block comment
E266: ### Block comment

            Line too long (106 > 79 characters)
            Open

                from which you sample to create a prediction. For the adjacency, they would be numbers between 0 and 1
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Too many leading '#' for block comment
            Open

            ## Actual training
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate inline comments by at least two spaces.

            An inline comment is a comment on the same line as a statement.
Inline comments should be separated by at least two spaces from the
statement. They should start with a # and a single space.

Each line of a block comment starts with a # and a single space
(unless it is indented text inside the comment).

Okay: x = x + 1  # Increment x
Okay: x = x + 1    # Increment x
Okay: # Block comment
E261: x = x + 1 # Increment x
E262: x = x + 1  #Increment x
E262: x = x + 1  #  Increment x
E265: #Block comment
E266: ### Block comment

            Line too long (90 > 79 characters)
            Open

                            + '-n_alphas={n_alphas}-n_models={n_models}-n_clusterings={n_clusterings}'
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Too many leading '#' for block comment
            Open

            ## Imports and setup
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate inline comments by at least two spaces.

            An inline comment is a comment on the same line as a statement.
Inline comments should be separated by at least two spaces from the
statement. They should start with a # and a single space.

Each line of a block comment starts with a # and a single space
(unless it is indented text inside the comment).

Okay: x = x + 1  # Increment x
Okay: x = x + 1    # Increment x
Okay: # Block comment
E261: x = x + 1 # Increment x
E262: x = x + 1  #Increment x
E262: x = x + 1  #  Increment x
E265: #Block comment
E266: ### Block comment

            Line too long (108 > 79 characters)
            Open

                                               n_alphas=N_ALPHAS, n_models=N_MODEL_SAMPLES, n_clusterings=N_CLUSTERINGS,
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Expected 2 blank lines after class or function definition, found 1
            Open

            n_ξ_samples = 5  # Number of embeddings sampled at the embedding layer.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate top-level function and class definitions with two blank lines.

            Method definitions inside a class are separated by a single blank
line.

Extra blank lines may be used (sparingly) to separate groups of
related functions.  Blank lines may be omitted between a bunch of
related one-liners (e.g. a set of dummy implementations).

Use blank lines in functions, sparingly, to indicate logical
sections.

Okay: def a():\n    pass\n\n\ndef b():\n    pass
Okay: def a():\n    pass\n\n\nasync def b():\n    pass
Okay: def a():\n    pass\n\n\n# Foo\n# Bar\n\ndef b():\n    pass
Okay: default = 1\nfoo = 1
Okay: classify = 1\nfoo = 1

E301: class Foo:\n    b = 0\n    def bar():\n        pass
E302: def a():\n    pass\n\ndef b(n):\n    pass
E302: def a():\n    pass\n\nasync def b(n):\n    pass
E303: def a():\n    pass\n\n\n\ndef b(n):\n    pass
E303: def a():\n\n\n\n    pass
E304: @decorator\n\ndef a():\n    pass
E305: def a():\n    pass\na()
E306: def a():\n    def b():\n        pass\n    def c():\n        pass

            Line too long (103 > 79 characters)
            Open

                    In the minibatch setting, `required_nodes` is usually the 2-hop neighbourhood of `final_nodes`.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Expected 2 blank lines, found 1
            Open

            def make_vae(n_nodes, dims, q_overlap, p_ξ_slices):
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate top-level function and class definitions with two blank lines.

            Method definitions inside a class are separated by a single blank
line.

Extra blank lines may be used (sparingly) to separate groups of
related functions.  Blank lines may be omitted between a bunch of
related one-liners (e.g. a set of dummy implementations).

Use blank lines in functions, sparingly, to indicate logical
sections.

Okay: def a():\n    pass\n\n\ndef b():\n    pass
Okay: def a():\n    pass\n\n\nasync def b():\n    pass
Okay: def a():\n    pass\n\n\n# Foo\n# Bar\n\ndef b():\n    pass
Okay: default = 1\nfoo = 1
Okay: classify = 1\nfoo = 1

E301: class Foo:\n    b = 0\n    def bar():\n        pass
E302: def a():\n    pass\n\ndef b(n):\n    pass
E302: def a():\n    pass\n\nasync def b(n):\n    pass
E303: def a():\n    pass\n\n\n\ndef b(n):\n    pass
E303: def a():\n\n\n\n    pass
E304: @decorator\n\ndef a():\n    pass
E305: def a():\n    pass\na()
E306: def a():\n    def b():\n        pass\n    def c():\n        pass

            Line too long (108 > 79 characters)
            Open

                    # is used for feature prediction. After sampling of embedding values (using the parameters output by
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (86 > 79 characters)
            Open

                    # so we have one entry per output/loss in the model. Each entry must also have
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (199 > 79 characters)
            Open

            # * Decoding seems to be much better with an intermediate dense layer (i.e. `with_l1=True`) before the final dense layer for feature reconstruction and the bilinear layer for adjacency reconstruction
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (240 > 79 characters)
            Open

            # This section generates VAE models with different overlap values for each of the STBM scenarios, and trains them on the distributed Dask cluster. It recovers the history of the losses during training, and the weights of the trained models.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (98 > 79 characters)
            Open

                        batcher_kws={'adj': A, 'features': features, 'target_func': make_target_func(labels)},
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (104 > 79 characters)
            Open

            # `target_func` is given to the training function (in fact it's given as a parameter to the fullbatcher,
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (82 > 79 characters)
            Open

                """Build a VAE, train it, and return the training history and trained weights.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (92 > 79 characters)
            Open

                    # the `utils.expand_dims_tile()` calls: the target value is the same for each of the
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            At least two spaces before inline comment
            Open

                        np.zeros(1), # ignored
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate inline comments by at least two spaces.

            An inline comment is a comment on the same line as a statement.
Inline comments should be separated by at least two spaces from the
statement. They should start with a # and a single space.

Each line of a block comment starts with a # and a single space
(unless it is indented text inside the comment).

Okay: x = x + 1  # Increment x
Okay: x = x + 1    # Increment x
Okay: # Block comment
E261: x = x + 1 # Increment x
E262: x = x + 1  #Increment x
E262: x = x + 1  #  Increment x
E265: #Block comment
E266: ### Block comment

            Line too long (90 > 79 characters)
            Open

                    # Note that keras models can't be sent easily across the network, as pickling them
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (81 > 79 characters)
            Open

                            + '/S2_S3-ov_noov_asym-n_nodes={n_nodes}-n_clusters={n_clusters}'
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (114 > 79 characters)
            Open

                is a cross-entropy loss, and the combination of these two is not numerically stable (it easily vanishes to 0).
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (101 > 79 characters)
            Open

                where sigmoid and cross-entropy are combined into a numerically stable operation), such that what
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (102 > 79 characters)
            Open

                the `vae` outputs for the adj and feature predictions is the values that should go into a sigmoid.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (108 > 79 characters)
            Open

                    """Create training targets given the batch's adjacency matrix, the subset of nodes it used as input,
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (86 > 79 characters)
            Open

                Note that the fullbatcher takes care of normalising and centring the input labels,
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (106 > 79 characters)
            Open

            # the targets are always the same, but the way it's coded is unchanged so we're left with a bit of useless
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Expected 2 blank lines, found 1
            Open

            def get_loss_weights(n_nodes, dims, q_overlap):
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate top-level function and class definitions with two blank lines.

            Method definitions inside a class are separated by a single blank
line.

Extra blank lines may be used (sparingly) to separate groups of
related functions.  Blank lines may be omitted between a bunch of
related one-liners (e.g. a set of dummy implementations).

Use blank lines in functions, sparingly, to indicate logical
sections.

Okay: def a():\n    pass\n\n\ndef b():\n    pass
Okay: def a():\n    pass\n\n\nasync def b():\n    pass
Okay: def a():\n    pass\n\n\n# Foo\n# Bar\n\ndef b():\n    pass
Okay: default = 1\nfoo = 1
Okay: classify = 1\nfoo = 1

E301: class Foo:\n    b = 0\n    def bar():\n        pass
E302: def a():\n    pass\n\ndef b(n):\n    pass
E302: def a():\n    pass\n\nasync def b(n):\n    pass
E303: def a():\n    pass\n\n\n\ndef b(n):\n    pass
E303: def a():\n\n\n\n    pass
E304: @decorator\n\ndef a():\n    pass
E305: def a():\n    pass\na()
E306: def a():\n    def b():\n        pass\n    def c():\n        pass

            Line too long (100 > 79 characters)
            Open

                In the original model, the adj and feature outputs of `vae` would be parameters to distributions
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (82 > 79 characters)
            Open

                        # Keras feeds this to the embedding-gaussian divergence loss function,
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (96 > 79 characters)
            Open

                        # kwargs sent to the fullbatch generator. See `nw2vec.batching.fullbatches()` to see
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (130 > 79 characters)
            Open

            # We're now in a position to generate a range of models (different overlaps for each scenario) and train them on the Dask cluster.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Expected 2 blank lines, found 1
            Open

            def make_target_func(labels):
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate top-level function and class definitions with two blank lines.

            Method definitions inside a class are separated by a single blank
line.

Extra blank lines may be used (sparingly) to separate groups of
related functions.  Blank lines may be omitted between a bunch of
related one-liners (e.g. a set of dummy implementations).

Use blank lines in functions, sparingly, to indicate logical
sections.

Okay: def a():\n    pass\n\n\ndef b():\n    pass
Okay: def a():\n    pass\n\n\nasync def b():\n    pass
Okay: def a():\n    pass\n\n\n# Foo\n# Bar\n\ndef b():\n    pass
Okay: default = 1\nfoo = 1
Okay: classify = 1\nfoo = 1

E301: class Foo:\n    b = 0\n    def bar():\n        pass
E302: def a():\n    pass\n\ndef b(n):\n    pass
E302: def a():\n    pass\n\nasync def b(n):\n    pass
E303: def a():\n    pass\n\n\n\ndef b(n):\n    pass
E303: def a():\n\n\n\n    pass
E304: @decorator\n\ndef a():\n    pass
E305: def a():\n    pass\na()
E306: def a():\n    def b():\n        pass\n    def c():\n        pass

            Line too long (106 > 79 characters)
            Open

                # Ignore warnings here: TensorFlow always complains that we convert a sparse matrix to a dense matrix,
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (90 > 79 characters)
            Open

                    Dict associating loss name to the history of that loss value during model training
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (105 > 79 characters)
            Open

                So instead, we push the sigmoid operation into the loss computation (implemented in the codec object,
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (89 > 79 characters)
            Open

                    # used behind the scenes by Model.predict_fullbatch() and Model.fit_fullbatches()
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (91 > 79 characters)
            Open

            # The target values also depend on the STBM scenario used, so here we make a function which
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (93 > 79 characters)
            Open

                # there is a different session for each worker (which is where tensor values are stored),
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (98 > 79 characters)
            Open

                But! The last operation on these layers would be a sigmoid, and the loss we compute downstream
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (99 > 79 characters)
            Open

                # Build a function which, given an input (which would be the embeddings, i.e. the output of the
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (110 > 79 characters)
            Open

                    # The output of the model for the features is therefore passed to the nw2vec.codecs.SoftmaxMultinomial
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (80 > 79 characters)
            Open

                    # we want to inspect on the receiver end, i.e. in this notebook process.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Inline comment should start with '# '
            Open

                for (skey, mkey), history in submitted.items():#tqdm(submitted.items()):
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate inline comments by at least two spaces.

            An inline comment is a comment on the same line as a statement.
Inline comments should be separated by at least two spaces from the
statement. They should start with a # and a single space.

Each line of a block comment starts with a # and a single space
(unless it is indented text inside the comment).

Okay: x = x + 1  # Increment x
Okay: x = x + 1    # Increment x
Okay: # Block comment
E261: x = x + 1 # Increment x
E262: x = x + 1  #Increment x
E262: x = x + 1  #  Increment x
E265: #Block comment
E266: ### Block comment

            Inline comment should start with '# '
            Open

                for cid in [1]:#tqdm(range(N_CLUSTERINGS)):
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate inline comments by at least two spaces.

            An inline comment is a comment on the same line as a statement.
Inline comments should be separated by at least two spaces from the
statement. They should start with a # and a single space.

Each line of a block comment starts with a # and a single space
(unless it is indented text inside the comment).

Okay: x = x + 1  # Increment x
Okay: x = x + 1    # Increment x
Okay: # Block comment
E261: x = x + 1 # Increment x
E262: x = x + 1  #Increment x
E262: x = x + 1  #  Increment x
E265: #Block comment
E266: ### Block comment

            Line too long (80 > 79 characters)
            Open

                        # or Dask would just assume the different samples are the same task.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (100 > 79 characters)
            Open

                                                  slice(dim_ξ_adj - q_overlap, dim_ξ_adj - q_overlap + dim_ξ_v)]
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Expected 2 blank lines, found 1
            Open

            def submit_training(**kws):
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate top-level function and class definitions with two blank lines.

            Method definitions inside a class are separated by a single blank
line.

Extra blank lines may be used (sparingly) to separate groups of
related functions.  Blank lines may be omitted between a bunch of
related one-liners (e.g. a set of dummy implementations).

Use blank lines in functions, sparingly, to indicate logical
sections.

Okay: def a():\n    pass\n\n\ndef b():\n    pass
Okay: def a():\n    pass\n\n\nasync def b():\n    pass
Okay: def a():\n    pass\n\n\n# Foo\n# Bar\n\ndef b():\n    pass
Okay: default = 1\nfoo = 1
Okay: classify = 1\nfoo = 1

E301: class Foo:\n    b = 0\n    def bar():\n        pass
E302: def a():\n    pass\n\ndef b(n):\n    pass
E302: def a():\n    pass\n\nasync def b(n):\n    pass
E303: def a():\n    pass\n\n\n\ndef b(n):\n    pass
E303: def a():\n\n\n\n    pass
E304: @decorator\n\ndef a():\n    pass
E305: def a():\n    pass\na()
E306: def a():\n    def b():\n        pass\n    def c():\n        pass

            Expected an indented block (comment)
            Open

                        #for dim_ξ in tqdm(range(max_dim_ξ, max_dim_ξ // 2 - 1, -2)):
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Use indent_size (PEP8 says 4) spaces per indentation level.

            For really old code that you don't want to mess up, you can continue
to use 8-space tabs.

Okay: a = 1
Okay: if a == 0:\n    a = 1
E111:   a = 1
E114:   # a = 1

Okay: for item in items:\n    pass
E112: for item in items:\npass
E115: for item in items:\n# Hi\n    pass

Okay: a = 1\nb = 2
E113: a = 1\n    b = 2
E116: a = 1\n    # b = 2

            Line too long (83 > 79 characters)
            Open

                        # Don't show progress bars for these tasks, there are hundreds of them.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Too many leading '#' for block comment
            Open

            ## Gather successful tasks and save to disk
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate inline comments by at least two spaces.

            An inline comment is a comment on the same line as a statement.
Inline comments should be separated by at least two spaces from the
statement. They should start with a # and a single space.

Each line of a block comment starts with a # and a single space
(unless it is indented text inside the comment).

Okay: x = x + 1  # Increment x
Okay: x = x + 1    # Increment x
Okay: # Block comment
E261: x = x + 1 # Increment x
E262: x = x + 1  #Increment x
E262: x = x + 1  #  Increment x
E265: #Block comment
E266: ### Block comment

            Line too long (96 > 79 characters)
            Open

                    used to interpret the output of `q_model`. Currently this list has always a single item.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (113 > 79 characters)
            Open

                would be the μ values and values of the diagonal of log(Σ) (just like the parametrisation of the embeddings).
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (112 > 79 characters)
            Open

            # through an argument to the training function) and generates the values against which training loss is computed
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Block comment should start with '# '
            Open

                        #for dim_ξ in tqdm(range(max_dim_ξ, max_dim_ξ // 2 - 1, -2)):
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate inline comments by at least two spaces.

            An inline comment is a comment on the same line as a statement.
Inline comments should be separated by at least two spaces from the
statement. They should start with a # and a single space.

Each line of a block comment starts with a # and a single space
(unless it is indented text inside the comment).

Okay: x = x + 1  # Increment x
Okay: x = x + 1    # Increment x
Okay: # Block comment
E261: x = x + 1 # Increment x
E262: x = x + 1  #Increment x
E262: x = x + 1  #  Increment x
E265: #Block comment
E266: ### Block comment

            Line too long (94 > 79 characters)
            Open

                                    print("Skipped skey = {}, mkey = {}, already present in saved results"
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (101 > 79 characters)
            Open

                    The list of codec names used to interpret the output of `vae`. The output of `vae` is made of
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (109 > 79 characters)
            Open

                (parameters to a Bernoulli distribution for each value in the matrix). The same goes for binary features.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (92 > 79 characters)
            Open

            # We start by defining the training parameters, and some helpers for the loops further down.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Expected 2 blank lines, found 1
            Open

            def make_train_vae(dims, q_overlap, p_ξ_slices, skey, with_progress=True):
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate top-level function and class definitions with two blank lines.

            Method definitions inside a class are separated by a single blank
line.

Extra blank lines may be used (sparingly) to separate groups of
related functions.  Blank lines may be omitted between a bunch of
related one-liners (e.g. a set of dummy implementations).

Use blank lines in functions, sparingly, to indicate logical
sections.

Okay: def a():\n    pass\n\n\ndef b():\n    pass
Okay: def a():\n    pass\n\n\nasync def b():\n    pass
Okay: def a():\n    pass\n\n\n# Foo\n# Bar\n\ndef b():\n    pass
Okay: default = 1\nfoo = 1
Okay: classify = 1\nfoo = 1

E301: class Foo:\n    b = 0\n    def bar():\n        pass
E302: def a():\n    pass\n\ndef b(n):\n    pass
E302: def a():\n    pass\n\nasync def b(n):\n    pass
E303: def a():\n    pass\n\n\n\ndef b(n):\n    pass
E303: def a():\n\n\n\n    pass
E304: @decorator\n\ndef a():\n    pass
E305: def a():\n    pass\na()
E306: def a():\n    def b():\n        pass\n    def c():\n        pass

            Line too long (94 > 79 characters)
            Open

                    history = dict((title, np.array(values)) for title, values in history.history.items())
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (85 > 79 characters)
            Open

                                    'dim_l1': dim_l1, 'dim_ξ_adj': dim_ξ_adj, 'dim_ξ_v': dim_ξ_v,
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (81 > 79 characters)
            Open

            π_gap_range = np.linspace(start=.075, stop=.12, num=N_CLUSTERINGS, endpoint=True)
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (109 > 79 characters)
            Open

                    # Slices used to separate what part of the embeddings is used for adjacency prediction from what part
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (107 > 79 characters)
            Open

                    # the encoder), the first item in this list defines the input to adjacency decoding, and the second
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (102 > 79 characters)
            Open

                # Build the actual VAE. This takes the encoder, adds a sampling layer, puts that into the decoder,
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (102 > 79 characters)
            Open

                    # Weights used in computing the total final loss of the model. The three values are applied to
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Expected 2 blank lines after class or function definition, found 1
            Open

            n_epochs = 1000
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate top-level function and class definitions with two blank lines.

            Method definitions inside a class are separated by a single blank
line.

Extra blank lines may be used (sparingly) to separate groups of
related functions.  Blank lines may be omitted between a bunch of
related one-liners (e.g. a set of dummy implementations).

Use blank lines in functions, sparingly, to indicate logical
sections.

Okay: def a():\n    pass\n\n\ndef b():\n    pass
Okay: def a():\n    pass\n\n\nasync def b():\n    pass
Okay: def a():\n    pass\n\n\n# Foo\n# Bar\n\ndef b():\n    pass
Okay: default = 1\nfoo = 1
Okay: classify = 1\nfoo = 1

E301: class Foo:\n    b = 0\n    def bar():\n        pass
E302: def a():\n    pass\n\ndef b(n):\n    pass
E302: def a():\n    pass\n\nasync def b(n):\n    pass
E303: def a():\n    pass\n\n\n\ndef b(n):\n    pass
E303: def a():\n\n\n\n    pass
E304: @decorator\n\ndef a():\n    pass
E305: def a():\n    pass\na()
E306: def a():\n    def b():\n        pass\n    def c():\n        pass

            Line too long (109 > 79 characters)
            Open

            # minibatch (which is why we need a function to create the targets for each minibatch). In the fullbatch case
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (106 > 79 characters)
            Open

                # This function runs in Dask workers, i.e. in another process on another machine. We need to make sure
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (92 > 79 characters)
            Open

                    # requires many hacks. Instead we just transport the weights, and recreate any model
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (88 > 79 characters)
            Open

            dim_l1 = max(max_dim_ξ, int(np.round(np.exp(np.mean(np.log([max_dim_ξ, N_CLUSTERS]))))))
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Expected 2 blank lines, found 1
            Open

            def get_statuses():
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate top-level function and class definitions with two blank lines.

            Method definitions inside a class are separated by a single blank
line.

Extra blank lines may be used (sparingly) to separate groups of
related functions.  Blank lines may be omitted between a bunch of
related one-liners (e.g. a set of dummy implementations).

Use blank lines in functions, sparingly, to indicate logical
sections.

Okay: def a():\n    pass\n\n\ndef b():\n    pass
Okay: def a():\n    pass\n\n\nasync def b():\n    pass
Okay: def a():\n    pass\n\n\n# Foo\n# Bar\n\ndef b():\n    pass
Okay: default = 1\nfoo = 1
Okay: classify = 1\nfoo = 1

E301: class Foo:\n    b = 0\n    def bar():\n        pass
E302: def a():\n    pass\n\ndef b(n):\n    pass
E302: def a():\n    pass\n\nasync def b(n):\n    pass
E303: def a():\n    pass\n\n\n\ndef b(n):\n    pass
E303: def a():\n\n\n\n    pass
E304: @decorator\n\ndef a():\n    pass
E305: def a():\n    pass\na()
E306: def a():\n    def b():\n        pass\n    def c():\n        pass

            At least two spaces before inline comment
            Open

                for (skey, mkey), history in submitted.items():#tqdm(submitted.items()):
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate inline comments by at least two spaces.

            An inline comment is a comment on the same line as a statement.
Inline comments should be separated by at least two spaces from the
statement. They should start with a # and a single space.

Each line of a block comment starts with a # and a single space
(unless it is indented text inside the comment).

Okay: x = x + 1  # Increment x
Okay: x = x + 1    # Increment x
Okay: # Block comment
E261: x = x + 1 # Increment x
E262: x = x + 1  #Increment x
E262: x = x + 1  #  Increment x
E265: #Block comment
E266: ### Block comment

            Statement ends with a semicolon
            Open

                gc.collect();
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Compound statements (on the same line) are generally discouraged.

            While sometimes it's okay to put an if/for/while with a small body
on the same line, never do this for multi-clause statements.
Also avoid folding such long lines!

Always use a def statement instead of an assignment statement that
binds a lambda expression directly to a name.

Okay: if foo == 'blah':\n    do_blah_thing()
Okay: do_one()
Okay: do_two()
Okay: do_three()

E701: if foo == 'blah': do_blah_thing()
E701: for x in lst: total += x
E701: while t < 10: t = delay()
E701: if foo == 'blah': do_blah_thing()
E701: else: do_non_blah_thing()
E701: try: something()
E701: finally: cleanup()
E701: if foo == 'blah': one(); two(); three()
E702: do_one(); do_two(); do_three()
E703: do_four();  # useless semicolon
E704: def f(x): return 2*x
E731: f = lambda x: 2*x

            Line too long (117 > 79 characters)
            Open

            # Explore the effect of overlap size in slicing embeddings for scenarios having different network-feature correlation
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (151 > 79 characters)
            Open

            # The rest of the notebook generates VAE models for the different scenarios and different overlaps. This section defines the model-generating function.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (112 > 79 characters)
            Open

                    # If `with_l1=True`, this defines whether the adjacency flow and the feature flow share the same weights
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (83 > 79 characters)
            Open

                    # embedding-gaussian divergence scales with number of embedding dimensions,
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (109 > 79 characters)
            Open

            # for each batch. The complexity of this comes from the fact that for minibatches, the targets change at each
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (81 > 79 characters)
            Open

                    # but we also don't want it to overpower the other losses, hence the 1e-2
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (89 > 79 characters)
            Open

                    # a shape which is compatible with the corresponding output, which is why we have
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (84 > 79 characters)
            Open

                    The list of codec names (corresponding to subclasses of nw2vec.codecs.Codec)
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (108 > 79 characters)
            Open

                    the output of `q_model` (so that the first codec name her is always the single codec in `q_codecs`),
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (97 > 79 characters)
            Open

                        utils.expand_dims_tile(utils.expand_dims_tile(batch_adj + np.eye(batch_adj.shape[0]),
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (195 > 79 characters)
            Open

            # * The weights for this layer should NOT be shared between adj and feature tracks (i.e. `shared_l1=False`), since this would re-create a dependency between the separated parts of the embeddings.
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (86 > 79 characters)
            Open

                model_key = (kws['model_type'], kws['spill_v2adj'], kws['ov'], kws['sampling_id'])
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Too many leading '#' for block comment
            Open

            ## Train
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate inline comments by at least two spaces.

            An inline comment is a comment on the same line as a statement.
Inline comments should be separated by at least two spaces from the
statement. They should start with a # and a single space.

Each line of a block comment starts with a # and a single space
(unless it is indented text inside the comment).

Okay: x = x + 1  # Increment x
Okay: x = x + 1    # Increment x
Okay: # Block comment
E261: x = x + 1 # Increment x
E262: x = x + 1  #Increment x
E262: x = x + 1  #  Increment x
E265: #Block comment
E266: ### Block comment

            Line too long (109 > 79 characters)
            Open

                        # They key uniquely identifies a task in Dask, so it's important we include the sampling id here,
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Missing whitespace around operator
            Open

                config.gpu_options.allow_growth=True
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Surround operators with a single space on either side.

            - Always surround these binary operators with a single space on
  either side: assignment (=), augmented assignment (+=, -= etc.),
  comparisons (==, <, >, !=, <=, >=, in, not in, is, is not),
  Booleans (and, or, not).

- If operators with different priorities are used, consider adding
  whitespace around the operators with the lowest priorities.

Okay: i = i + 1
Okay: submitted += 1
Okay: x = x * 2 - 1
Okay: hypot2 = x * x + y * y
Okay: c = (a + b) * (a - b)
Okay: foo(bar, key='word', *args, **kwargs)
Okay: alpha[:-i]

E225: i=i+1
E225: submitted +=1
E225: x = x /2 - 1
E225: z = x **y
E225: z = 1and 1
E226: c = (a+b) * (a-b)
E226: hypot2 = x*x + y*y
E227: c = a|b
E228: msg = fmt%(errno, errmsg)

            Line too long (97 > 79 characters)
            Open

                    # Massage the output history and return both history and model weights. Both these values
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            At least two spaces before inline comment
            Open

                for cid in [1]:#tqdm(range(N_CLUSTERINGS)):
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate inline comments by at least two spaces.

            An inline comment is a comment on the same line as a statement.
Inline comments should be separated by at least two spaces from the
statement. They should start with a # and a single space.

Each line of a block comment starts with a # and a single space
(unless it is indented text inside the comment).

Okay: x = x + 1  # Increment x
Okay: x = x + 1    # Increment x
Okay: # Block comment
E261: x = x + 1 # Increment x
E262: x = x + 1  #Increment x
E262: x = x + 1  #  Increment x
E265: #Block comment
E266: ### Block comment

            Line too long (81 > 79 characters)
            Open

                        # Loop over all overlap values: 0 up to maximum overlap by steps of 2
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Expected 2 blank lines after class or function definition, found 1
            Open

            gathered = {}
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate top-level function and class definitions with two blank lines.

            Method definitions inside a class are separated by a single blank
line.

Extra blank lines may be used (sparingly) to separate groups of
related functions.  Blank lines may be omitted between a bunch of
related one-liners (e.g. a set of dummy implementations).

Use blank lines in functions, sparingly, to indicate logical
sections.

Okay: def a():\n    pass\n\n\ndef b():\n    pass
Okay: def a():\n    pass\n\n\nasync def b():\n    pass
Okay: def a():\n    pass\n\n\n# Foo\n# Bar\n\ndef b():\n    pass
Okay: default = 1\nfoo = 1
Okay: classify = 1\nfoo = 1

E301: class Foo:\n    b = 0\n    def bar():\n        pass
E302: def a():\n    pass\n\ndef b(n):\n    pass
E302: def a():\n    pass\n\nasync def b(n):\n    pass
E303: def a():\n    pass\n\n\n\ndef b(n):\n    pass
E303: def a():\n\n\n\n    pass
E304: @decorator\n\ndef a():\n    pass
E305: def a():\n    pass\na()
E306: def a():\n    def b():\n        pass\n    def c():\n        pass

            Expected 2 blank lines after class or function definition, found 1
            Open

            statuses = get_statuses()
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Separate top-level function and class definitions with two blank lines.

            Method definitions inside a class are separated by a single blank
line.

Extra blank lines may be used (sparingly) to separate groups of
related functions.  Blank lines may be omitted between a bunch of
related one-liners (e.g. a set of dummy implementations).

Use blank lines in functions, sparingly, to indicate logical
sections.

Okay: def a():\n    pass\n\n\ndef b():\n    pass
Okay: def a():\n    pass\n\n\nasync def b():\n    pass
Okay: def a():\n    pass\n\n\n# Foo\n# Bar\n\ndef b():\n    pass
Okay: default = 1\nfoo = 1
Okay: classify = 1\nfoo = 1

E301: class Foo:\n    b = 0\n    def bar():\n        pass
E302: def a():\n    pass\n\ndef b(n):\n    pass
E302: def a():\n    pass\n\nasync def b(n):\n    pass
E303: def a():\n    pass\n\n\n\ndef b(n):\n    pass
E303: def a():\n\n\n\n    pass
E304: @decorator\n\ndef a():\n    pass
E305: def a():\n    pass\na()
E306: def a():\n    def b():\n        pass\n    def c():\n        pass

            Line too long (128 > 79 characters)
            Open

                print("{}: gathered newly finished tasks (+{}, total {})".format(datetime.datetime.utcnow(), newly_gathered, len(gathered)))
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

            Line too long (84 > 79 characters)
            Open

                        make_train_vae, dims, kws['q_overlap'], kws['p_ξ_slices'], scenario_key,
            Severity: Minor
            Found in projects/behaviour/scenarios-exploration-asymmetric-n_nodes=1000.py by pep8

            Limit all lines to a maximum of 79 characters.

            There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side.  The default wrapping on such
devices looks ugly.  Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.

Reports error E501.

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