| .codeclimate.yml | |
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| README.md | |
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| Tree_pipeline.sh | |
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| codon_from_fasta.py | 138 | D 1 day |
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| incomplete_gene_tst/cns_mock1.fa | |
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| incomplete_gene_tst/cns_mock2.fa | |
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| incomplete_gene_tst/cns_mock3.fa | |
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| incomplete_gene_tst/cns_mock4.fa | |
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| incomplete_gene_tst/cns_mock5.fa | |
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| incomplete_gene_tst/cns_mock6.fa | |
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| sort_fasta.py | 11 | A 0 mins |
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| sorted_test/LIB4480_20x_consensus_cds.fa.sorted | |
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| sorted_test/LIB4480_20x_consensus_cds.fa.sorted.filtered | |
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| sorted_test/LIB4481_20x_consensus_cds.fa.sorted | |
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| sorted_test/LIB4481_20x_consensus_cds.fa.sorted.filtered | |
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| sorted_test/LIB4482_20x_consensus_cds.fa.sorted | |
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| sorted_test/LIB4482_20x_consensus_cds.fa.sorted.filtered | |
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| sorted_test/LIB4483_20x_consensus_cds.fa.sorted | |
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| sorted_test/LIB4483_20x_consensus_cds.fa.sorted.filtered | |
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