migraf/fhir-kindling

version: '3.8'

volumes:
  blaze_benchmark:
  hapi_benchmark:
  linux_benchmark:
  pg_data:


services:
  blaze:
    image: "samply/blaze:latest"
    environment:
      JAVA_TOOL_OPTIONS: "-Xmx2g"
      BASE_URL: "http://localhost:9090"
    ports:
      - "9090:8080"
    volumes:
      - blaze_benchmark:/app/data

  hapi:
    image: "hapiproject/hapi:latest"
    ports:
      - "9091:8080"
    volumes:
      - hapi_benchmark:/data/hapi
    environment:
      hapi.fhir.default_encoding: json
      hapi.fhir.: json
      hapi.fhir.server_address: "http://localhost:9091/fhir"

  linux:
    image: ghcr.io/linuxforhealth/fhir-server:latest
    environment:
      TRACE_SPEC: "org.linuxforhealth.fhir.*=INFO"
      TRACE_FILE: "stdout"
    command: bash -c " java -jar /opt/fhir-server/tools/fhir-persistence-schema-*-cli.jar --db-type postgresql --prop db.host=postgres --prop db.port=5432 --prop db.database=fhirdb --prop user=fhiradmin --prop password=change-password --create-schemas && java -jar /opt/fhir-server/tools/fhir-persistence-schema-*-cli.jar --db-type postgresql --prop db.host=postgres --prop db.port=5432 --prop db.database=fhirdb --prop user=fhiradmin --prop password=change-password --prop resourceTypes=AllergyIntolerance,CarePlan,CareTeam,CodeSystem,Condition,Consent,Coverage,Device,DiagnosticReport,DocumentReference,Encounter,ExplanationOfBenefit,Goal,Group,Immunization,List,Location,Medication,MedicationAdministration,MedicationDispense,MedicationRequest,MedicationStatement,Observation,Organization,Patient,Practitioner,PractitionerRole,Procedure,Provenance,StructureDefinition,ValueSet --update-schema-fhir --grant-to fhirserver && java -jar /opt/fhir-server/tools/fhir-persistence-schema-*-cli.jar --db-type postgresql --prop db.host=postgres --prop db.port=5432 --prop db.database=fhirdb --prop user=fhiradmin --prop password=change-password --update-schema-batch --grant-to fhirbatch && /opt/ol/wlp/bin/server run"
    volumes:
      - type: bind
        source: ./configs/linux4health/config
        target: /opt/ol/wlp/usr/servers/defaultServer/config
        read_only: true
      - type: bind
        source: ./configs/linux4health/configDropins
        target: /opt/ol/wlp/usr/servers/defaultServer/configDropins/overrides
        read_only: true
      - type: bind
        source: ./configs/linux4health/userlib
        target: /opt/ol/wlp/usr/servers/defaultServer/userlib
        read_only: true
      - type: bind
        source: ./configs/linux4health/openapi.json
        target: /opt/ol/wlp/usr/servers/defaultServer/apps/expanded/fhir-openapi.war/META-INF/openapi.json
        read_only: true
      - type: bind
        source: ./configs/linux4health/bulkdata
        target: /output/bulkdata

    healthcheck:
      start_period: 32s
      interval: 30s
      timeout: 5s
      retries: 3
      # https://docs.docker.com/compose/compose-file/#variable-substitution
      test: curl --fail -k -u 'fhiruser:change-password' 'https://localhost:9443/fhir-server/api/v4/$$healthcheck'
    ports:
      - 9080:9080
      # - 9443:9443
    depends_on:
      postgres:
        condition: service_healthy

  postgres:
    image: postgres:14-alpine
    # https://dba.stackexchange.com/q/275378/46472
    shm_size: 256MB
    volumes:
      - type: volume
        source: pg_data
        target: /var/lib/postgresql/data/
      - type: bind
        source: ./configs/postgres/init
        target: /docker-entrypoint-initdb.d
    environment:
      POSTGRES_DB: fhirdb
      POSTGRES_USER: fhiradmin
      POSTGRES_PASSWORD: change-password
      PGDATA: /var/lib/postgresql/data/pgdata
    healthcheck:
      test: [ "CMD-SHELL", "pg_isready -d fhirdb -U fhiradmin" ]
      start_period: 22s
      interval: 5s
      timeout: 4s
      retries: 3
    # "Larger settings for shared_buffers usually require a corresponding increase in max_wal_size, 
    # to spread out the process of writing large quantities of new or changed data over a longer period of time."
    command: " -c shared_buffers=2GB -c max_wal_size=3GB -c max_connections=100 -c max_prepared_transactions=100 -c max_locks_per_transaction=128 "
    ports:
      - 5432:5432