examples/ndmg_pipeline.pipe from neurodata/ndmg

examples/ndmg_pipeline.pipe
Summary

Maintainability

Test Coverage

Issues
<?xml version="1.0" encoding="UTF-8"?>
<pipeline version=".2">
        <connections>
                <connection source="setupndmg_1.dwiListFile" sink="runndmg_1.dwi" />
                <connection source="setupndmg_1.bvalListFile" sink="runndmg_1.bval" />
                <connection source="setupndmg_1.bvecListFile" sink="runndmg_1.bvec" />
                <connection source="setupndmg_1.mprageListFile" sink="runndmg_1.mprage" />
        </connections>
        <icons>
                <icon id="0" value="iVBORw0KGgoAAAANSUhEUgAAAFYAAABBCAYAAABLhVPUAAAg2klEQVR42u1cB1hU17aeCJpooqZq&#xA;bjRq1AAzDGVoQ4dhZmBo0qK5iTHRtGtiEluiubmJGo0pJpqEakGKIh2p0ntvgiBKGYoKMyIEu2CE&#xA;2evtfYYyFTD33Xfz3rvzfes7dU75z9r/+tfa+xwa7U/+c6cdmeOt6W/rPcPvY28Nf1/vmX6FXnMD&#xA;ruH5Ee/H/cHFOgTx3o28zV9/KtuNc/xXr9n+3/toYpvhv8tnRsBH3hp+q1bTArVX02I1aP/50Wje&#xA;Twbs9pobWMrdGHWfHZeOjGrzQF9cDIzhSmAnZyDOJ1FAx/M6UC1nVsdSEO+9SDDoKATGSCUyuFwE&#xA;5jFnwO7vcfcELuEV3jP9D2PQP3hF09dmNe3Q0/8nwVtH+/FxHw0/Hy+a/zOK2+gjFUFGVbnA+TwG&#xA;6aCqceBMs7IQb0s0XletBCoxxu+Vqtffq6CmrI58sIpPA8d1JwB7/SVspV4a/mF4+q7HLD+9/9WA&#xA;kqbp/WjAdoFL/E2jknZg3L+1UnEfbajeS4AwbC4A3keRoHujDNgZGcB/JRy4W6KQVXgymJVk4v9W&#xA;jIOn31sCZulZlIey8zOQVVgKuNgEg4vRcVi1JAi8FgSCk0Mi2K0vQA6vZALPDQPsmAx82yQksIgD&#xA;209KkQs7tsH7Ud/tGGgvH01fntdMXwMaDR75UwLpRQuge83w3+Sx/HgIf13aZcvAGjCq6QTLI7XA&#xA;+SwHHD5MeU3JY6GGSYeqEgKY7p1y0L1drtITjc7mAfejaPBYeQQwFxMvVGncNZmImdMPWvVDU5pe&#xA;Vi8I2FEjlgdKke32bPxQjqeSe/iTeOWeWaR5rVp8vI6zNRdYNV2gjQZBC4awF3aDq1UomBRkI91b&#xA;ZUn2UKBJA5ixEioXkyn21mhtqPnMGGpn4unbGMA+RUBNCrPB2TEMg+lHASewjUJmR2okRtGNYIyN&#xA;HVmPTCLqJOygamS3KQu5ax0Hj4XByOajUjQVsM52cWCYdRF02kSU6VW0gzvrRKPXDL+N/zbvJdEX&#xA;c5aH57LjbezIBkS/ewu0R+6B9vBdClSjPCFwP45FxAsxgLnLoOAxDOYjeP4YBmyYCZULdaCqkqIB&#xA;YcF57qZYC10of9o66cyvvI1Rw9x3IpGbcTAiYLqanQTDwmZEPJVZ2zEOhDozTmgAvudpxFmXDTo1&#xA;d1WCyjp1CdltzlL6r2F+832veUESF9OIilW0Xxb+D4F5aDaWNa8K3MKibPcnXDfJz0a2vomIfu8m&#xA;BabOg7tg2HgFzJIugN2BRBgNRhW6cOEJ8n88/xOJ8OaJ6cB799QHTj4n3vN8PhC8H/UHN62wYfst&#xA;2f56ly8/RfjOzfRkGeeddDCJrh+/afeVx8Ew5+KUwI6Z5YEScHRLBnrFbTlQdcpvg6PzacQ4f1np&#xA;P4wLV0DgGCNhNF0B7trkq6tpvs/9a2XRTF9z/oZTbUZ1eXJN1TogCdix5zCQuRSY9vtiwe67+LHt&#xA;5/Sg5CkKVEnVbpufE2HV0iPIa3YgcraJKly9/Mh87F1DjCa5G+ylC8XrCFXQW8Xv4uX+sW281Ulg&#xA;FNc4bWCJmQVXY97NQFp1g6CNzTS0GVxZp8Aksl7tf7gfnEFkSm/tAc6m9H5vzQDOv8BLf13iYnE8&#xA;HHOdRBZQ5kAZcHbFgkVYGtIXFY+vtz2UgEbnW1ZA2QJyDIfPYz8SOIWB1+wA4L6aBHqlQnIDEt0O&#xA;8RKdNnGc6hvsKdQVXmXoNPc8o90qCib7GxS2gPU3BQ8FLDHrr7DiWI2VRfF1cLaOQfpFbUjt/hhM&#xA;h7eSQb+4bXwd5/0zQ0Qu/reB6jPL7w33lSED2EuRLKiWJ1OBtxlLo1vyEZxO9COWTXi+iwnVL1JK&#xA;QcP/ryR7IlFXr1qeH+lC0U566xVPk6g6ZL8xA6z2lyCTqHrEPNsBdOk+D7TbRN/rN/Q+rtMussTN&#xA;9JyjV4JS08VTDJT4Jp7eVQUWHQdRuy1Z4GYQAbw1SVM/DAwueYCGuRfHlwW8mGFvjYD1/7x0muG/&#xA;0yK0Dum3iSUmlbmj+rEY+G9HIPPoNJWSaNSu0qHyZerBaAS4r/rLsd8tDpYqXbxRYiMJMI3OK30f&#xA;5b6WMmD5bTGwQ2qAHVyDlcQpxNmeKbv/ZUwLnvYFoOnoHrMVL98aXf8778PU77RauxdRF42DI729&#xA;l0lvFcWo9Ny9BeCmHYaY1VMHQGZJG/J84Rjm9Gbpw8Gc62IWMexKC3zqn+BT/3V2XxRKSECy/yIP&#xA;MW+WAet8Pria4hM15KNJQO3ThUoGdYxnAziYEweJhJG9YPaxahDwo8F2Rw6w0s6DVmuPAfa2w7L7&#xA;cL7KV9NUxWnaLb0vESDxcqR2u1ig7h7obT1fqTqG/cdZiFDDVMAS2nG2igTTE1hfN12SKgYMsvf8&#xA;wHf/EKieTwZ+aR7ZINGWDGJQ88HaNxFnOZngahkMhi2Faj3VtDBrgJ2crE+OYVR50dwo78Jto/hG&#xA;ZL2nEEgzd1ibKuG7xYMbPUwi6zG4yR+gt4lt5TzrUInaG9a9cGWQ937KP1YKhY9OeiPEe9tEJcpR&#xA;vxvxXlemAxKo6C3d48usXMznOwqUHjDm24SHb/5P+H9imoZdf+gO8N5LBXZaBlicSAVnp3CJIp+O&#xA;mUFXEXB2xN5ePdPXjDqG1mEDzEfXOe+lg83f88Dq2xIwx1Rg+U0x2H+QgTwWHwPdc5dkL7Ybg6Ch&#xA;0yq6NK5DUxom9SarA0XIsL5r2VT3g/d9XdX/HVfHqzwuAXecCuq7gPtOmtI+tp/m1D0cqJr+B/iv&#xA;p0p0e38DpzVxwGrMp0AV8MMl9EHVBQ+93lLwWHJ48BVNP3vqRpp7tOjNPb3qACFBxP3lEDANr5Vb&#xA;r93ew9ER9nyr7n/mJ2vkRXx28+B07kmnXWys8sHsxQ8mu1nJG01i6oB+ccJrdRsuKf3XnRE2MK2s&#xA;jFSc3AyPxdn8gjOVzdnIWXAK6XWXIFIUcWMdA3WeSoz7XtR9Hw1/F3IcqXQSXZ6Ku6z2FYL5r+Xy&#xA;wGI5xRBe1VX3H867qfI8HVT1gHj5VPfG7Ly2EO8fhe227P/Jg7X/W7py1pV1ATgbM9Bk189bmww+&#xA;M/3ZU4AatMDFKLhBv7sYzKPS8NPAQPaWUKDx10YAOylDbaCyiEgb8Znlv4YCtavveXzStuloSsJj&#xA;Vj8rqgTxzWVdXY/h+Tql6NzajakoVj66HyjCQa/bbLqtkTq2UOSO/xuKbYBINGe7SJUAOjtGyWdv&#xA;B0skzJoOzO3SJEavsgORWu8kwv/IfBfD4w3M3jJEvNLVOhgIwFSV6VYZbuJBQH+gmgJYWBl4Lgx4&#xA;hwL1QvfT+IQNDyPYjTOaVEV8Hzz9VClY4QfhZhMpn01F1nQQ2pkMTO2W/rkYzFLttp6fGa1iG5LJ&#xA;kfXGtbUzmec7+W6cqEDM61cVz8f3TpToVwgngh2mA/ttWcBdl4wVQi2laZ2cY7vUnthj6eHT+p3F&#xA;lEfy38YpXlnOOHDshHTSDaK6kHy/Ehw3nvpk/OLbRJUPmwmpDhyipFEZNSIHbGs3cuXIeFGrqGyl&#xA;8Oqk+ftK4cA8vG+2vOgXXcXqIwgrBT4Bd1Q5zCCgE/DHgiff/bSElaycNjMaL4HNF3ng6BMPLqYR&#xA;iDimckal6csjTZ8AZR53BpwdQuXA422IRCZF2aoD1o3SveQYi7u7Z2MvK1Df5HvwxVx+GHDvE+/H&#xA;mVauHCfvygdzXyknawtF0aRZywUoodiJ1BRs9uZbmWxMtde8LdrhbB7RM9m58bUNuJhHhBJ6GD8e&#xA;qby1iE1c9E98a5h9sXWM+8nxR9VFgzQAXwG2XznCNKirDOw8/1S6RNoN4mYUjMxS0yeAu1qKnF1D&#xA;FQGNwuatDTUe5ALIEydifaq0kLPpjFy9c2rr+Ru29WPLdl/kgt3HGVTKir3tG3JuuSRAKPoQbxsm&#xA;wQhneLA0thpo8BswvsGehTUzebjqzuXMG6cXEtiitIU9a0jqPHZsEoyVqAV7NZFkJifPkmK7rXJm&#xA;peF/2uxMJkUDAvdwxBjlUr2eEuT5fBDYb4mWAbXqsHJWIwqcVvPG0oW3NglM8YVME9yi5R0d8/F0&#xA;yGZ7NtbARVTair14g4L4x7pXfEivrB3xvU6D6xIMaowUVGIzHlwDe4co4L6RLKdNx5t102VwcopR&#xA;Wu+wPm3Qwrc8Ef/nzXG6kAW3TfQ92c/i1wpSdJfPwOxpezS95wTG2++Pp3Qo7/3I8X6kVdpHEPfj&#xA;KOTw0QSw2lCpr+4E01MBPcB9Mxlsvsyfzv5Ip/nqMv6q0zGkwM1KPX+daFzZcxOvYgdXJTqsSwW3&#xA;ZcHA+L4AZt69Og7qmM26JQYOJxIHo9PArOmUOw/rTBNY/FQmL7VwuuroHjeuFEiqraSLheKDozoY&#xA;PJ87cm7CU2lH/uL1VGCsWU425a32u2KBnZIxUVs9mgikLuD4RgTZ3ojta2OonaMC2B8eNjjZfp4L&#xA;fI/TiFmlvgBimHEBeK8mfb44scbHYl1yh7txpI7seVfR/F7wecy/1okZCi8HloLmPWVAZW3Ggz4w&#xA;+jgdXI1PyCccvhVgcUheSwv4MVT3j5teOFjvKsAPtTFMhSbulWZfucjicO2Il2agHY1U5XF2dcs8&#xA;/sw4kG7mwbK9nwTMCtIHxdsTu4QdkT6PDjXrGMMV2+Rk2rxDT5sePutt8Ut5vf3GdHDYnAG2/8gG&#xA;i28LwQp7j93WbCDVd1XAYUpAq144JiHdJvabMsF6ax6QKXdNEqkhIJflwbAo41wHDTDXwcBi2fOy&#xA;dqYasD7NvLKgpAloqH9SQGVtrrCdPCz5DCu6Xi6tJsUgUk7UL20FZm07mEScJb0H4OwSE0LOTZSD&#xA;bMptvzETmLeuI9zyMzCv+qXx/iYvodw5x4dIfxS2D7Sh7gWpVW3E23LMcjKHDC4Xgot9CHjNCNj6&#xA;Pu3IzFWLjm50WJ/aahZcc4ve1L1T/6xwCz7RddmLtviuFBGPUOeVDm+lSQyTusEksAU47+VTPa7W&#xA;7nGwOLmO4kYMaBrm0FnynDqwGoM0OF0wZW3ZySpkEn1u0mzK9tNs0KtqV1ovcIlKkNYc5Ktv3HdS&#xA;Ean8uepG3KWRNIxVlW2iAzVp2CsTcVB6y2pH8lwtqFlOh6odGMwybBLZOoAb4yjVM+q56Oh6o/xm&#xA;Y4XiCbELWH/+FcugY6TCT2VKtZ0Sm68L1d6Exc/lwDrVBZa7a4FregKePtsiC4SfYqrqyAj9mP1m&#xA;0sijAz1qwVuSUgOzbopUbuM6RU6qDihgd+epBN6NGbp7tJhTLrveySeB6uMTWMbK1yyYdyv1Pef6&#xA;7eC/HVmlSqvSh6vAxSaE8iaLb0uQVqtYZ1TaqA5QbeJYaebUU02WbX4qVnsTpifrwP2lUDB9Jxk0&#xA;7l8bA2AEe+Vm5dJf/8FZt3BT3ZYBri8eg+cqLqoET+N+L5hsSoUnm4Ry6+dfFFKya/LEpAdsd2ar&#xA;3LZ6qb8XSSLw/B1ZReFsH015rItpdP34tZLOPWZfSYh5fFqow/aoSHZ6Rg0G83dZYG1/PE15Ksk0&#xA;cKC6QR1cKA6fIkDdxRnMl5iLPjIsbO5Xt5/N9lxkvDFNlifvYADd5QG98SQNrhng9YfGQFpY0Ag8&#xA;6/iRhaUXkSpwZ94Rgz0/Chan1I2v0/mxECx+lI/+FoFlchKMcb4L7LbnKEuylivgM//n5Yz27pXy&#xA;FbB64LsmSXSG7iDP+UGnqCoWHcqWYuDiZUAc0h0qr2HeKD2J58OIMX6vPO75bGCKwC7qkrQvSZRJ&#xA;adeW7haDgtbpKIA2baF4Lc5aAhTS0yLs1e+76IYKZt3swZzZfwx7KQ5U/UbyoN58CYNyAW+LokEf&#xA;Sy4QdXYC3+wkmt8iVOm5hC54JifgxcSz8MhIP1i/Gq9U+rP5Rz6YhsmXLXnrkpBuXZc8sM2Xb++h&#xA;7cHeKvZWkI/IxfqUxHZP8Qhu0ftJp95xPXHJZN0qQB+pAie3cOQ1L+gS1n4pOOXz02q96kzEMqaC&#xA;YwLn6Aosl+5MN/cnF0Wq+IRGFLOmsVxddnFJ4lljDNC1UaBwsBqYJwVZhk9xIvBiYi1Sx7fzhJ1J&#xA;bs8Gvq63K3uTxcGydqVqWU07qWyBrsyYAlbKebA6VCLPxa2iMopfW0VfKx5Dv7odXJnhQ6tpAc/T&#xA;SGS325egFlSTohxwsQqhRp5w3pyonBNgMcCOeP4eTlOrcSoYYlDc6ouXfQnwOHAlYm7tGPVuRYAH&#xA;tVt6HKZV24OBV14Krxh8rL9bFqg3sX0h1+RxMrA8vEJdIAuRE/TNPc/gaxDJdWJmNIGTVxwyPV4z&#xA;uWPg7JLS7NT9qaC0HbnXJ0axzPEPJV3XVNQfKAX2mQwqIbDfFQf8DRFgtzueAtY4pl4mE+p5RrZj&#xA;ziCvBQl4MWi025lw8BWqbiAU+VNgSwE/Sp44EdSk0jQ1qL+txyZ5proZXsg4JwtUDuba5WSbLIBz&#xA;xJfG5oex9WFrwVaGaUVbRfp9QKlY/Woi6SGeFFgcLzZKFQHlNMqdkpsyr8jewSMYuDJ2pjTbsvkh&#xA;ETnzQ8CwTdpJaLs/AdwMwmUP0DIqN1Ll5Mn2HGS3DScCpPjbOhFdGXUdYz2aQ9jOkgcyTW/dgoEZ&#xA;mCfsEC4PqSAApePlCGnwwvILfnsDz7+O9xPgeVMM9gppgMNUcr1jvnS534Rap5iGtoq+U2rKRa3g&#xA;8cJRuUEZStYushwtP0oUt7EympDHgqNZsmMFPlmldWS8gM28I9/tInAOw09CZqAYVgKEG/F8nxxP&#xA;1XaC19NBoEcq65irzI7WSDwWHwVnrePAtYwAB9co4KxLxGlsXuH0gMX8C/1zMTBLLdedZmLwuBjE&#xA;NXj6AV5vj4OYIZ4Pw5aCrRxbM/FUHKwe6PxSJMu3gbKHXR5bO9/oTJPK7iKzkBqcYieoSxwkpJpl&#xA;mnTeUtV2J6c40rKTJ2oFmv7NNj8lqg5ckioMVgCpoE80B2HPB1pt15arLLtZRSLbz7KRKxb5htsz&#xA;0ROXuhQDStfSuOrt0/TYn8b+Z+seA89UNcse6ywNbj+Dpw9U8arZ20kShXUf0eC6FaGX53Mbmkzi&#xA;zqnPAt9OA/OgSlW6vJ0aCjA/6AOHN1PBOF56DFLncHSJA4c1eSMYWGkvAklJyVAfQ6H6sQGuZseR&#xA;wDYaTQwBEhuRzErlU+PEIJP1yTD7mlywuSGVUX22KlWASlBJXeC3q2PHeLz7EvBNwuGJri6Z4w4w&#xA;8DRZVWLA/C5XAWwq/R16BP0G7I/SEOkZnqzX2OHDM6q2nSaXZrmvLtAgWUSl3+zAJrD8qhrYv16Q&#xA;jq01jx8eDV5BizxeDJpsaBBwN5wC71n+MDp65R4Z0kN1WygO1fm6ELE+zpSMivzfsSWRqE4Dmeo+&#xA;wEwMshu2YMWCimxdVcql8oDNuXoZmW1MG5ZJU/ePUoPcfqxP0wG3FNl1+AH1v0fmVx4tw819Qq/q&#xA;lQtV1matvikEJfCFIiqVtd9SVq520LJ57BiwASs9ng8CZl+pWmBd7EOpjMtV7wQyC6wqVsyTyQXw&#xA;1yQCa1PGCA2RJkqCzu1nFdJQI2nOT0XrsRvu0Rjpf82Z5vuozH5Es2ar06OPXbsCrB3pOEMjy/2d&#xA;NBDPwetvjm3X/SYfMfbnK/7vV2y5czs6MVVFKOjXThxws5Q41eqHQhUaXOxFkgOzX5rujAFpHNEB&#xA;zIxr48C6rwiTUsF6Wuhj3jP8zjs7hsq9nSJr/LciwOuJQHB0jAVHbvQB3T0XZtl+kz84VrDmv5bY&#xA;6jkv6KtZd64yFDhyMb6hndgaJ6s0OTFC772YU48D4sDu6VSmnj7bgpYk1Iwu99nMGOkLXVh4Htjr&#xA;k5A+zu8fGelT/I8XbkUjFtvOgKq6r+3fc0H3nHyGZXaiWmm/lcIrKwyiO7S0z96T81Lzn89RU3r5&#xA;LYxTUJTMYLcAU6/HA5BRda4SqKTr22teAJgdo050jdHawx0dSdJHEgFGQzdbbgSINCsi+jNPUWeq&#xA;Mxzk4PHeyzXYAz+dbtmPvSEZYb5FOj8W+XksPWrpidWIo14YaPmVUHwss68QX9O2pVFYRu7JU93t&#xA;HtuAjCcJZmN9YFTHYv3QWqXh9Sc7weRwK5gdagIfDT9PpaFEHksPA/NamVx6K3AJA0fXeKpSRXpg&#xA;KY7BHCs7+GzPnj0zSNV8+cnKqD9SHyWFEmmzHtgwnf2fK7uACOfzXklErLQmMeFkzJPtRsnnqXFh&#xA;vNWJYLchCRl/liVZFlm9a0FRU6XAlOhw1WVCVuYFsPxB/YA7VnoTWO8rolLZl+vv/6CKW10NIpH7&#xA;itBCQhWKEeMRTAk7Vi0L6iPdMnRMC+anz1Dcarsjb8iwq0tJZJOyITW2qlV0ycK3HNyXBYOtYwxa&#xA;ElcDmkO9D1t8JjzpMZ77J1bDIxLlHoGZg73guiQYsf0rkUxQccQPfp9yj7AIsfIu2rrpn5A4m0QO&#xA;qx3ziunB2fLU2GDl8ZE5ZqE1wPkgE5kGXCTghVL3fG4oQxWwfF4KmvSVJW8Nv3c8nzkMroZh4K4X&#xA;hjwWHiX5b5fqUXs9hYrDhEiFiLsuFVwZIcDanA6L0upgdu9l9AhM2W2CNWo/Z2x5QTH2klWxis0a&#xA;XsZN3W5ztkKwEYdpt4i0VeT1pNCz0+h0IxKYRQ1P1tQF9tHY604g6x0FmHOLEGdDFrB/Og/jfHpu&#xA;cCsFbP2QaAxMesWtcWB5grQRuSCsBKxmAMdhbcpEcSLpPPDdE0ZU9qcrdL8oakHCy9Y78sDy21LE&#xA;fT0RrN84TQGmHlySTU0svxReATzTk+PBaE7PZcR3iJIb+TfGf8Zi8RzsuTUKQ+5JEb6BBFhHbqT6&#xA;wcT5rYjnngr6qWK1735pNww5rKy789zYsn6yGMwPNYxvd7JJaJtUl1MJw5NHhIYpTUiapnaA11NB&#xA;oF/YWkG6oMk+K9p7FyjWCaZjzLou4L6ZAqwt6TC7r3tKYImZvJ8KJhvTqH4vB9tThFPVlSNf1W4T&#xA;b5ZZ94AaBjpWHJEfYi8/LgunsKwTnaperLuoVTf4V93qu89TL/hVwjyL/fWHHN7MGua8hQN9tfRd&#xA;Mf0kMfJ6PPDg1C9v0Px0vOYGXbD5PI/iHat9RYjvGo9GCw+k3CbXrJiVHaQjDQwLmqcFMHnPQID1&#xA;5IpjZfD4FdmmTlEBkh8HIAK3RUcpajI/VDbZcVNNqy88r9PaMyytQonPyI6t1S9RXYw3C63GGVSr&#xA;MqiYS5cVwGMqB9Zh78Xq4B7Zj5nVB26MU62kSjitjJIawKHh97qbbmghKUw4cWOQ7ZYciY5MlqKP&#xA;sxYybp/ctF5l+7RAJQMgmHWdYHGwGJm8mypxXXoM9L/IhlnXSadgvzsG85aStHorFZHh9VMc+wEO&#xA;ps8y2kSZ0nqG+A087VK3P+mKt9+aBSZBzRSQBok9oJ/dOwZsv17jzUlf1ni5fvAzsq/APBa8NPxW&#xA;/7H3DxYcPqJf2gZOgjhww7LFxTESPFih4L48mHrRgbzAxl2fMmWvJ5X27ioAtyVH4anGtvEC9crD&#xA;ZWC5OgFZrE16XSq7FOjgPdwacpun0zuxiQxWI73DlN6eZACIgBsLhjFXpG8k4iBkubdm3FuJpJoK&#xA;kxdqYQ721kGcEFz8w2/LvKLpz8W0IJnspsjrQrzXEkG3vmvSm2cHVCLmlzlK/Dq79wp4zQnciOdr&#xA;FbeRUSukdUzN4cJ35MZxtfUcUUpVvy3G+Xw0MHN/GweSNGeH17NH8LwE262X6wan9VKc+/LwcwSb&#xA;f+6luUcDNtt+moPoF7oVImoLOApiwTy0BhkWNQPvjSSwIFwo472kTkv40dE5HlwtI8F6baJS3xT9&#xA;x0Jg7czYp6pOYPZ2CtJt6JoK2GbVg4yJzhb/nXiz2amaNz3nB/no5/evIjypVX/PVLvhvjaWUotI&#xA;mk6LBY2HczjpOxb//HuzmHM9/nKsyckhmtQNhl1ZYdneM/3eId9dsfyuWO6dLc62zHFqsN+UgVxM&#xA;oyTGRULQHr4HVmE18GJCrXzlSnyZlPYOS3thZSRXRBVY7S+cDn9nqbpm/tZkEzLul/NhvrdW/f0P&#xA;tc8N7sReuR9PfyWiHzf7OByIsnivZuRr1Q82MNOvXmBmXdv9b3p13u+ltTTfebJZ26qFR8+ZRE28&#xA;4EuKGuzASpION3s/Gliqd/kaNUpkzKz3FsLc9g7FmukBbFvJQI05V68gg39kIe6aZKRf0jYlsBYH&#xA;y24qfuPFJFjIstlcBkYnOqkXkdVpVMOYy2C1s1Jm3f0bKxruLPiTfPiBvFrvf8pnfmC915OBpdiT&#xA;o7w1Al6hdPHsAD+t0Y9AjJnO73exV2cjW884WBFcDo93XjowdizbNfFrOOtTQa9MOC2lQYBftSgY&#xA;WBGdpTqNv+sZ18JMnfohewxSx5Rf1MCAc1eng07lHbn1Di6JhdotMPdP/Q0YL01/vlFpO5IFdswY&#xA;N2+ARWgd2O0ttBjbXzoyfPqJB+f9dCLwp/VZElnTTxQBb006fiBdcuvpxTfBbXn4iOWes13ecwL+&#xA;pupjQH+a36olx3ezE86DKnCJacPgjomg0+Mw7Y86/FAMZr80yQFDNCn7QCNw1uWCq3EkCASJ4PhK&#xA;GnJYh3WrXzNi5vXhFDcRbLaWIUbZLfmPQVTcBoEF1d3fTr5jg0HV+tN+bGei7uv3MX9t6gizu08J&#xA;WMsjNSOGmRcjqbEHMoPNJn/prnjEcpdUf9Irb4N+hhhsNpdI2PsbECvyEugW/CbHrWTeIKEbzL85&#xA;h7BHIrOD5+XrqthzXXRPjeBgHP6n9lLV4AaYej53+Fvbr4sHyfdixoC131uIpuulpO+N8+4ZsP20&#xA;fMJLk3qw7MM6Oue3adGA8bE2cF8SCtZbKpDlF2fBbkMByffbvGf6G/2v/vaWt6aflbt2WIjjqyk9&#xA;3DdSR5ydYoB9uEopNWZc7AbbbdngxgwbcHSLv4o1s8Rd5zjYbq+Y4MSq2+BiFYM9dEAJQEbJTWAU&#xA;31DiVoFZbL/3jIDdROB7zQpikg/okA+s0f4v/Yhy8KQFLaO+uqHpv8/NIDyPuzZlwGZb9i033bBq&#xA;H42A18Yq86PfOsyjl95EspFdsR9qzKy3VYD1ZxUY4BuI/V0DcnI43YJbzYfkOLT//BSywBn+jVZf&#xA;VE/Z3JmZ18DjheBo3Dr2YGVykHz9bdJi9P97YDX8fDznHxnUT+hRC6pudj9y1Tl505Pmu+I/iD0M&#xA;uLMC9T0WhVw031tHUcG4XKq6A5Zf1iCPF0NDyWtK/0Hqj5QzaT8/6TPDb7MT5/Qlm23lv3PW5tR7&#xA;LA75ngSjf/e1/Rf5hElOQYwAXQAAAABJRU5ErkJggg==" />
        </icons>
        <moduleGroup id="ndmg_1" name="ndmg" posX="0" posY="0" sourceCode="" recordsWorkflow="true">
                <metadata>
                        <data key="__creationDateKey" value="" />
                </metadata>
                <module id="setupndmg_1" name="setup ndmg" package="m2g" icon="0" posX="216" posY="72" sourceCode="" location="pipeline://braincloud1.cs.jhu.edu//share0/ndmg/ndmg/scripts/ndmg_setup.py">
                        <metadata>
                                <data key="__creationDateKey" value="Thu Oct 22 15:52:26 EDT 2015" />
                        </metadata>
                        <input id="setupndmg_1.sourceDir" name="sourceDir" required="false" enabled="true" order="0">
                                <format type="String" cardinality="1" />
                                <values>
                                        <value>{inDir}</value>
                                </values>
                        </input>
                        <output id="setupndmg_1.dwiListFile" name="dwiListFile" required="false" enabled="true" isListFile="true" order="1">
                                <format type="File" cardinality="1">
                                        <fileTypes>
                                                <filetype name="list file" extension="list" description="list of things to be processed" />
                                        </fileTypes>
                                </format>
                        </output>
                        <output id="setupndmg_1.bvalListFile" name="bvalListFile" required="false" enabled="true" isListFile="true" order="2">
                                <format type="File" cardinality="1">
                                        <fileTypes>
                                                <filetype name="list file" extension="list" description="list of things to be processed" />
                                        </fileTypes>
                                </format>
                        </output>
                        <output id="setupndmg_1.bvecListFile" name="bvecListFile" required="false" enabled="true" isListFile="true" order="3">
                                <format type="File" cardinality="1">
                                        <fileTypes>
                                                <filetype name="list file" extension="list" description="list of things to be processed" />
                                        </fileTypes>
                                </format>
                        </output>
                        <output id="setupndmg_1.mprageListFile" name="mprageListFile" required="false" enabled="true" isListFile="true" order="4">
                                <format type="File" cardinality="1">
                                        <fileTypes>
                                                <filetype name="list file" extension="list" description="list of things to be processed" />
                                        </fileTypes>
                                </format>
                        </output>
                </module>
                <module id="runndmg_1" name="run ndmg" package="m2g" icon="0" posX="235" posY="291" sourceCode="" location="pipeline://braincloud1.cs.jhu.edu//share0/ndmg/ndmg/scripts/ndmg_pipeline.py" gridVariables="-l h_vmem=6G">
                        <tag />
                        <metadata>
                                <data key="__creationDateKey" value="Sat Jan 30 16:23:50 EST 2016" />
                        </metadata>
                        <input id="runndmg_1.dwi" name="dwi" required="false" enabled="true" order="0">
                                <format type="File" cardinality="1">
                                        <fileTypes>
                                                <filetype name="File" extension="" description="Any type of data file" />
                                        </fileTypes>
                                </format>
                        </input>
                        <input id="runndmg_1.bval" name="bval" required="false" enabled="true" order="1">
                                <format type="File" cardinality="1">
                                        <fileTypes>
                                                <filetype name="File" extension="" description="Any type of data file" />
                                        </fileTypes>
                                </format>
                        </input>
                        <input id="runndmg_1.bvec" name="bvec" required="false" enabled="true" order="2">
                                <format type="File" cardinality="1">
                                        <fileTypes>
                                                <filetype name="File" extension="" description="Any type of data file" />
                                        </fileTypes>
                                </format>
                        </input>
                        <input id="runndmg_1.mprage" name="mprage" required="true" enabled="true" order="3">
                                <format type="File" cardinality="1">
                                        <fileTypes>
                                                <filetype name="File" extension="" description="Any type of data file" />
                                        </fileTypes>
                                </format>
                        </input>
                        <input id="runndmg_1.atlas" name="atlas" required="true" enabled="true" order="4">
                                <format type="File" cardinality="1">
                                        <fileTypes>
                                                <filetype name="NIFTI GZ" extension="nii.gz" description="Gzipped NIFTI file." />
                                                <filetype name="NIFTI" extension="nii" description="Uncompressed Nifti" />
                                        </fileTypes>
                                </format>
                                <values>
                                        <value>pipeline://braincloud1.cs.jhu.edu/{atlas}</value>
                                </values>
                        </input>
                        <input id="runndmg_1.mask" name="mask" required="true" enabled="true" order="5">
                                <format type="File" cardinality="1">
                                        <fileTypes>
                                                <filetype name="NIFTI" extension="nii" description="Uncompressed Nifti" />
                                                <filetype name="NIFTI GZ" extension="nii.gz" description="Gzipped NIFTI file." />
                                        </fileTypes>
                                </format>
                                <values>
                                        <value>pipeline://braincloud1.cs.jhu.edu/{mask}</value>
                                </values>
                        </input>
                        <input id="runndmg_1.outDir" name="outDir" required="true" enabled="true" order="6">
                                <format type="String" cardinality="1" />
                                <values>
                                        <value>{outDir}</value>
                                </values>
                        </input>
                        <input id="runndmg_1.mr_mni" name="mr_mni" required="true" enabled="true" order="7">
                                <format type="File" cardinality="1">
                                        <fileTypes>
                                                <filetype name="File" extension="" description="Any type of data file" />
                                        </fileTypes>
                                </format>
                                <values>
                                        <value>pipeline://braincloud1.cs.jhu.edu/{labels}</value>
                                </values>
                        </input>
                </module>
                <variables>
                        <variable name="outDir">/brainstore/MR/scratch/swu4_ndmg</variable>
                        <variable name="labels">/brainstore/MR/atlases/desikan.list</variable>
                        <variable name="mask">/share0/m2g/src/m2g/data/Atlas/MNI152_T1_1mm_brain_mask.nii</variable>
                        <variable name="inDir">/brainstore/MR/data/SWU4/raw</variable>
                        <variable name="atlas">/brainstore/MR/atlases/MNI152_T1_1mm.nii.gz</variable>
                </variables>
        </moduleGroup>
</pipeline>