openSNP/snpr

<div class="general__container container">
  <h3 class="general__title">Updates</h3>
  <ul class="nav nav-tabs updates__tabs" role="tablist">
    <li role="presentation" class="active"><a href="#publications" aria-controls="publications" role="tab" data-toggle="tab">New publications</a></li>
    <li role="presentation"><a href="#newusers" aria-controls="newusers" role="tab" data-toggle="tab">New users</a></li>
    <li role="presentation"><a href="#newgeno" aria-controls="newgeno" role="tab" data-toggle="tab">New genotypes</a></li>
    <li role="presentation"><a href="#newpheno" aria-controls="newpheno" role="tab" data-toggle="tab">New phenotypes</a></li>
    <li role="presentation"><a href="#snpcomments" aria-controls="snpcomments" role="tab" data-toggle="tab">SNP-comments</a></li>
    <li role="presentation"><a href="#phenocomments" aria-controls="phenocomments" role="tab" data-toggle="tab">Phenotype comments</a></li>
  </ul>

  <div class="tab-content">
    <div role="tabpanel" class="tab-pane well tabs__one-tab active" id="publications">
      <h3 class="updates__tab-title">New Publication <%=link_to(image_tag("rss.png"),"/paper/rss")%></h3>
      <div class="table-responsive">
        <table class="updates__tab-table table table-hover">
          <thead>
            <tr>
              <th>Author</th>
              <th>Title</th>
              <th>Found at</th>
              <th>SNPs</th>
            </tr>
          </thead>
          <%@newest_paper.each do |np|%>
          <tr>
            <td class="table-cell vertical-centered"><%=np.first_author%></td>
            <%if np.class == PlosPaper%>
            <td class="table-cell vertical-centered"><%= link_to( np.title.html_safe, "https://doi.org/"+np.doi)%></td>
            <%else%>
            <td class="table-cell vertical-centered"><%=link_to( np.title, np.mendeley_url)%></td>
            <%end%>
            <td class="table-cell vertical-centered"><%=np.created_at%></td>
            <td class="table-cell vertical-centered"><% np.snps.each do |s| %><%=link_to s.name, s%> <% end %></td>
          </tr>
          <%end%>
        </table>
      </div>
    </div>

    <div role="tabpanel" class="tab-pane well tabs__one-tab" id="newusers">
      <h3 class="updates__tab-title">Users</h3>
      <div class="table-responsive">
        <table class="updates__tab-table table table-hover">
          <thead>
            <tr>
              <th>Name</th>
              <th>ID</th>
              <th>#</th>
              <th>Joined on</th>
            </tr>
          </thead>
          <% @new_users.each_with_index do |nu, index| %>
          <tr>
            <td class="table-cell vertical-centered"><%= link_to(image_tag(nu.avatar.url(:head), class: "img-circle", width: "50px") + " #{nu.name}", nu) %></td>
            <td class="table-cell vertical-centered"><%= nu.id %></td>
            <td class="table-cell vertical-centered"><%= @user_count - index %></td>
            <td class="table-cell vertical-centered"><%= nu.created_at %></td>
          </tr>
          <% end %>
        </table>
      </div>
      <%= link_to("Show All Users", {:controller => "users", :action => "index"}, class: "btn btn-default center-block updates__tab-button") %>
    </div>

    <div role="tabpanel" class="tab-pane well tabs__one-tab" id="newgeno">
      <h3 class="updates__tab-title">New genotypes <%=link_to(image_tag("rss.png"),"/rss")%></h3>
      <%=auto_discovery_link_tag(:rss,"/rss", {:title => "RSS for all genotypes"})%>

      <div class="table-responsive">
        <table class="updates__tab-table table table-hover">
          <thead>
            <tr>
              <th>Uploaded by</th>
              <th>#</th>
              <th>Genotype-ID</th>
              <th>Uploaded on</th>
              <th></th>
              <th></th>
            </tr>
          </thead>
          <% @new_genotypes.each_with_index do |ng, index| %>
          <tr>
            <td class="table-cell vertical-centered"><%= link_to(image_tag(ng.user.avatar.url(:head), class: "img-circle", width: "50px") + " #{User.find(ng.user_id).name}", User.find(ng.user_id)) %></td>
            <td class="table-cell vertical-centered"><%= @genotype_count - index %></td>
            <td class="table-cell vertical-centered"><%= ng.id %></td>
            <td class="table-cell vertical-centered"><%= ng.created_at %></td>
            <td class="table-cell vertical-centered"><%= link_to "Description", ng, class: "btn btn-default" %></td>
            <td class="table-cell vertical-centered"><%= link_to "Download", '../data/' + ng.fs_filename, class: "btn btn-default"  %></td>
          </tr>
          <% end %>
        </table>
      </div>
      <%= link_to("Show All Genotypes", {:controller => "genotypes", :action => "index"}, class: "btn btn-default btn btn-default center-block updates__tab-button")%>
    </div>

    <div role="tabpanel" class="tab-pane well tabs__one-tab" id="newpheno">
      <h3 class="updates__tab-title">Phenotypes</h3>
      <div class="table-responsive">
        <table class="updates__tab-table table table-hover">
          <thead>
            <tr>
              <th>Name</th>
              <th style="width: 70%;">Variations</th>
              <th style="width: 10%"># of Users</th>
            </tr>
          </thead>
          <% @new_phenotypes.each do |nu| %>
          <tr>
            <td class="table-cell vertical-centered"><%= link_to nu.characteristic, nu %></td>
            <td class="table-cell vertical-centered">
              <ul><%nu.known_phenotypes.each do |kp|%>
                <li><%= kp %></li><%end%>
              </ul>
            </td>
            <td class="table-cell vertical-centered"><%= nu.number_of_users %></td>
          </tr>
          <% end %>
          </table>
        </div>
      <%= link_to("Show All Phenotypes", {:controller => "phenotypes", :action => "index"} ,class: "btn btn-default center-block updates__tab-button")%>
    </div>

    <div role="tabpanel" class="tab-pane well tabs__one-tab" id="snpcomments">
      <h3 class="updates__tab-title">SNP comments</h3>
      <div class="table-responsive">
        <table class="updates__tab-table table table-hover">
          <thead>
            <tr>
              <th>Comment by</th>
              <th style="width: 50%;">Subject</th>
              <th>Date</th>
              <th>SNP</th>
            </tr>
          </thead>
          <%@new_snp_comments.each do |pc|%>
           <tr>
             <td class="table-cell vertical-centered"><%if pc.user != nil%><%=link_to pc.user.name, pc.user%><%else%>Deleted User<%end%></td>
             <td class="table-cell vertical-centered"><%if pc.subject != ""%><%=pc.subject%><%else%>-<%end%></td>
             <td class="table-cell vertical-centered"><%=pc.created_at%></td>
             <td class="table-cell vertical-centered"><%=link_to pc.snp.name, pc.snp%></td>
           </tr>
          <%end%>
        </table>
      </div>
    </div>
    <div role="tabpanel" class="tab-pane well tabs__one-tab" id="phenocomments">
      <h3 class="updates__tab-title">Phenotypes comments</h3>
      <div class="table-responsive">
        <table class="updates__tab-table table table-hover">
          <thead>
            <tr>
              <th>Comment by</th>
              <th>Phenotype</th>
              <th style="width: 50%;">Subject</th>
              <th>Date</th>
            </tr>
          </thead>
          <%@new_phenotype_comments.each do |pc|%>
          <%if pc.phenotype != nil%>
          <tr>
            <td class="table-cell vertical-centered"><%if pc.user != nil%><%=link_to pc.user.name, pc.user%><%else%>Deleted User<%end%></td>
            <td class="table-cell vertical-centered"><%=link_to pc.phenotype.characteristic, pc.phenotype%></td>
            <td class="table-cell vertical-centered"><%if pc.subject != ""%><%=pc.subject%><%else%>-<%end%></td>
            <td class="table-cell vertical-centered"><%=pc.created_at%></td>
          </tr>
          <%end%>
          <%end%>
        </table>
      </div>
    </div>
  </div>
</div>