openSNP/snpr

# frozen_string_literal: true
namespace :genotypes do
  desc "calculate md5sums for genotypes"
  task :update => :environment do
    require "digest"
    @genotypes = Genotype.all
    @genotypes.each do |g|
        # get filename
        filename = ::Rails.root.to_s + "/public/data/" + g.fs_filename
        puts "MD5 for file " + filename
        md5 = Digest::MD5.file(filename).to_s
        puts "Md5 is"
        puts md5
        g.update_attributes(:md5sum => md5)
        puts "Updated!"
    end
  end
end