Complex method Plate::Creator#create_child_plates_from (46.6) Open
def create_child_plates_from(plate, current_user, creator_parameters) # rubocop:todo Metrics/AbcSize
stock_well_picker = plate.plate_purpose.stock_plate? ? ->(w) { [w] } : ->(w) { w.stock_wells }
parent_wells = plate.wells
parent_barcode = plate.human_barcode
- Read upRead up
- Exclude checks
Flog calculates the ABC score for methods. The ABC score is based on assignments, branches (method calls), and conditions.
You can read more about ABC metrics or the flog tool
Complex method Plate::Creator#create_plates (41.3) Open
def create_plates(source_plate_barcodes, current_user, creator_parameters = nil) # rubocop:todo Metrics/AbcSize
if source_plate_barcodes.blank?
# No barcodes have been scanned. This results in empty plates. This behaviour
# is used in a few circumstances. User comment:
# bs6: we use it to create 'pico standard' barcodes, as well as 'aliquot' barcodes.
- Read upRead up
- Exclude checks
Flog calculates the ABC score for methods. The ABC score is based on assignments, branches (method calls), and conditions.
You can read more about ABC metrics or the flog tool
Complex method Plate::Creator#create_plates_from_tube_racks! (35.8) Open
def create_plates_from_tube_racks!(
tube_racks,
barcode_printer,
scanned_user,
should_create_asset_group,
- Read upRead up
- Exclude checks
Flog calculates the ABC score for methods. The ABC score is based on assignments, branches (method calls), and conditions.
You can read more about ABC metrics or the flog tool
Method create_plates
has a Cognitive Complexity of 9 (exceeds 5 allowed). Consider refactoring. Open
def create_plates(source_plate_barcodes, current_user, creator_parameters = nil) # rubocop:todo Metrics/AbcSize
if source_plate_barcodes.blank?
# No barcodes have been scanned. This results in empty plates. This behaviour
# is used in a few circumstances. User comment:
# bs6: we use it to create 'pico standard' barcodes, as well as 'aliquot' barcodes.
- Read upRead up
Cognitive Complexity
Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.
A method's cognitive complexity is based on a few simple rules:
- Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
- Code is considered more complex for each "break in the linear flow of the code"
- Code is considered more complex when "flow breaking structures are nested"
Further reading
Plate::Creator#create_plates_from_tube_racks! is controlled by argument 'should_create_asset_group' Open
@created_asset_group = create_asset_group(created_plates) if should_create_asset_group
- Read upRead up
- Exclude checks
Control Parameter
is a special case of Control Couple
Example
A simple example would be the "quoted" parameter in the following method:
def write(quoted)
if quoted
write_quoted @value
else
write_unquoted @value
end
end
Fixing those problems is out of the scope of this document but an easy solution could be to remove the "write" method alltogether and to move the calls to "writequoted" / "writeunquoted" in the initial caller of "write".
Plate::Creator#create_child_plates_from contains iterators nested 2 deep Open
target_plate_purpose.create!(
:without_wells,
sanger_barcode: child_plate_barcode,
size: plate.size
) { |child| child.name = "#{target_plate_purpose.name} #{child.human_barcode}" }
- Read upRead up
- Exclude checks
A Nested Iterator
occurs when a block contains another block.
Example
Given
class Duck
class << self
def duck_names
%i!tick trick track!.each do |surname|
%i!duck!.each do |last_name|
puts "full name is #{surname} #{last_name}"
end
end
end
end
end
Reek would report the following warning:
test.rb -- 1 warning:
[5]:Duck#duck_names contains iterators nested 2 deep (NestedIterators)
Plate::Creator#execute has 5 parameters Open
def execute(source_plate_barcodes, barcode_printer, scanned_user, should_create_asset_group, creator_parameters = nil)
- Read upRead up
- Exclude checks
A Long Parameter List
occurs when a method has a lot of parameters.
Example
Given
class Dummy
def long_list(foo,bar,baz,fling,flung)
puts foo,bar,baz,fling,flung
end
end
Reek would report the following warning:
test.rb -- 1 warning:
[2]:Dummy#long_list has 5 parameters (LongParameterList)
A common solution to this problem would be the introduction of parameter objects.
Plate::Creator#create_asset_group has approx 10 statements Open
def create_asset_group(created_plates) # rubocop:todo Metrics/MethodLength
- Read upRead up
- Exclude checks
A method with Too Many Statements
is any method that has a large number of lines.
Too Many Statements
warns about any method that has more than 5 statements. Reek's smell detector for Too Many Statements
counts +1 for every simple statement in a method and +1 for every statement within a control structure (if
, else
, case
, when
, for
, while
, until
, begin
, rescue
) but it doesn't count the control structure itself.
So the following method would score +6 in Reek's statement-counting algorithm:
def parse(arg, argv, &error)
if !(val = arg) and (argv.empty? or /\A-/ =~ (val = argv[0]))
return nil, block, nil # +1
end
opt = (val = parse_arg(val, &error))[1] # +2
val = conv_arg(*val) # +3
if opt and !arg
argv.shift # +4
else
val[0] = nil # +5
end
val # +6
end
(You might argue that the two assigments within the first @if@ should count as statements, and that perhaps the nested assignment should count as +2.)
Plate::Creator#execute is controlled by argument 'should_create_asset_group' Open
@created_asset_group = create_asset_group(created_plates) if should_create_asset_group
- Read upRead up
- Exclude checks
Control Parameter
is a special case of Control Couple
Example
A simple example would be the "quoted" parameter in the following method:
def write(quoted)
if quoted
write_quoted @value
else
write_unquoted @value
end
end
Fixing those problems is out of the scope of this document but an easy solution could be to remove the "write" method alltogether and to move the calls to "writequoted" / "writeunquoted" in the initial caller of "write".
Plate::Creator#asset_group_name refers to 'now' more than self (maybe move it to another class?) Open
time_now_formatted = "#{now.year}-#{now.month}-#{now.day}-#{now.hour}#{now.min}#{now.sec}"
- Read upRead up
- Exclude checks
Feature Envy occurs when a code fragment references another object more often than it references itself, or when several clients do the same series of manipulations on a particular type of object.
Feature Envy reduces the code's ability to communicate intent: code that "belongs" on one class but which is located in another can be hard to find, and may upset the "System of Names" in the host class.
Feature Envy also affects the design's flexibility: A code fragment that is in the wrong class creates couplings that may not be natural within the application's domain, and creates a loss of cohesion in the unwilling host class.
Feature Envy often arises because it must manipulate other objects (usually its arguments) to get them into a useful form, and one force preventing them (the arguments) doing this themselves is that the common knowledge lives outside the arguments, or the arguments are of too basic a type to justify extending that type. Therefore there must be something which 'knows' about the contents or purposes of the arguments. That thing would have to be more than just a basic type, because the basic types are either containers which don't know about their contents, or they are single objects which can't capture their relationship with their fellows of the same type. So, this thing with the extra knowledge should be reified into a class, and the utility method will most likely belong there.
Example
Running Reek on:
class Warehouse
def sale_price(item)
(item.price - item.rebate) * @vat
end
end
would report:
Warehouse#total_price refers to item more than self (FeatureEnvy)
since this:
(item.price - item.rebate)
belongs to the Item class, not the Warehouse.
Plate::Creator#execute has approx 9 statements Open
def execute(source_plate_barcodes, barcode_printer, scanned_user, should_create_asset_group, creator_parameters = nil)
- Read upRead up
- Exclude checks
A method with Too Many Statements
is any method that has a large number of lines.
Too Many Statements
warns about any method that has more than 5 statements. Reek's smell detector for Too Many Statements
counts +1 for every simple statement in a method and +1 for every statement within a control structure (if
, else
, case
, when
, for
, while
, until
, begin
, rescue
) but it doesn't count the control structure itself.
So the following method would score +6 in Reek's statement-counting algorithm:
def parse(arg, argv, &error)
if !(val = arg) and (argv.empty? or /\A-/ =~ (val = argv[0]))
return nil, block, nil # +1
end
opt = (val = parse_arg(val, &error))[1] # +2
val = conv_arg(*val) # +3
if opt and !arg
argv.shift # +4
else
val[0] = nil # +5
end
val # +6
end
(You might argue that the two assigments within the first @if@ should count as statements, and that perhaps the nested assignment should count as +2.)
Plate::Creator#create_child_plates_from has approx 18 statements Open
def create_child_plates_from(plate, current_user, creator_parameters) # rubocop:todo Metrics/AbcSize
- Read upRead up
- Exclude checks
A method with Too Many Statements
is any method that has a large number of lines.
Too Many Statements
warns about any method that has more than 5 statements. Reek's smell detector for Too Many Statements
counts +1 for every simple statement in a method and +1 for every statement within a control structure (if
, else
, case
, when
, for
, while
, until
, begin
, rescue
) but it doesn't count the control structure itself.
So the following method would score +6 in Reek's statement-counting algorithm:
def parse(arg, argv, &error)
if !(val = arg) and (argv.empty? or /\A-/ =~ (val = argv[0]))
return nil, block, nil # +1
end
opt = (val = parse_arg(val, &error))[1] # +2
val = conv_arg(*val) # +3
if opt and !arg
argv.shift # +4
else
val[0] = nil # +5
end
val # +6
end
(You might argue that the two assigments within the first @if@ should count as statements, and that perhaps the nested assignment should count as +2.)
Plate::Creator#find_relevant_study contains iterators nested 2 deep Open
plate.contained_samples.each { |sample| return sample.studies.first if sample.studies.first }
- Read upRead up
- Exclude checks
A Nested Iterator
occurs when a block contains another block.
Example
Given
class Duck
class << self
def duck_names
%i!tick trick track!.each do |surname|
%i!duck!.each do |last_name|
puts "full name is #{surname} #{last_name}"
end
end
end
end
end
Reek would report the following warning:
test.rb -- 1 warning:
[5]:Duck#duck_names contains iterators nested 2 deep (NestedIterators)
Plate::Creator#create_plates has approx 10 statements Open
def create_plates(source_plate_barcodes, current_user, creator_parameters = nil) # rubocop:todo Metrics/AbcSize
- Read upRead up
- Exclude checks
A method with Too Many Statements
is any method that has a large number of lines.
Too Many Statements
warns about any method that has more than 5 statements. Reek's smell detector for Too Many Statements
counts +1 for every simple statement in a method and +1 for every statement within a control structure (if
, else
, case
, when
, for
, while
, until
, begin
, rescue
) but it doesn't count the control structure itself.
So the following method would score +6 in Reek's statement-counting algorithm:
def parse(arg, argv, &error)
if !(val = arg) and (argv.empty? or /\A-/ =~ (val = argv[0]))
return nil, block, nil # +1
end
opt = (val = parse_arg(val, &error))[1] # +2
val = conv_arg(*val) # +3
if opt and !arg
argv.shift # +4
else
val[0] = nil # +5
end
val # +6
end
(You might argue that the two assigments within the first @if@ should count as statements, and that perhaps the nested assignment should count as +2.)
Plate::Creator#find_relevant_study has approx 7 statements Open
def find_relevant_study(created_plates)
- Read upRead up
- Exclude checks
A method with Too Many Statements
is any method that has a large number of lines.
Too Many Statements
warns about any method that has more than 5 statements. Reek's smell detector for Too Many Statements
counts +1 for every simple statement in a method and +1 for every statement within a control structure (if
, else
, case
, when
, for
, while
, until
, begin
, rescue
) but it doesn't count the control structure itself.
So the following method would score +6 in Reek's statement-counting algorithm:
def parse(arg, argv, &error)
if !(val = arg) and (argv.empty? or /\A-/ =~ (val = argv[0]))
return nil, block, nil # +1
end
opt = (val = parse_arg(val, &error))[1] # +2
val = conv_arg(*val) # +3
if opt and !arg
argv.shift # +4
else
val[0] = nil # +5
end
val # +6
end
(You might argue that the two assigments within the first @if@ should count as statements, and that perhaps the nested assignment should count as +2.)
Plate::Creator#create_plates_from_tube_racks! has 5 parameters Open
def create_plates_from_tube_racks!(
- Read upRead up
- Exclude checks
A Long Parameter List
occurs when a method has a lot of parameters.
Example
Given
class Dummy
def long_list(foo,bar,baz,fling,flung)
puts foo,bar,baz,fling,flung
end
end
Reek would report the following warning:
test.rb -- 1 warning:
[2]:Dummy#long_list has 5 parameters (LongParameterList)
A common solution to this problem would be the introduction of parameter objects.
Plate::Creator#create_child_plates_from refers to 'plate' more than self (maybe move it to another class?) Open
stock_well_picker = plate.plate_purpose.stock_plate? ? ->(w) { [w] } : ->(w) { w.stock_wells }
parent_wells = plate.wells
parent_barcode = plate.human_barcode
- Read upRead up
- Exclude checks
Feature Envy occurs when a code fragment references another object more often than it references itself, or when several clients do the same series of manipulations on a particular type of object.
Feature Envy reduces the code's ability to communicate intent: code that "belongs" on one class but which is located in another can be hard to find, and may upset the "System of Names" in the host class.
Feature Envy also affects the design's flexibility: A code fragment that is in the wrong class creates couplings that may not be natural within the application's domain, and creates a loss of cohesion in the unwilling host class.
Feature Envy often arises because it must manipulate other objects (usually its arguments) to get them into a useful form, and one force preventing them (the arguments) doing this themselves is that the common knowledge lives outside the arguments, or the arguments are of too basic a type to justify extending that type. Therefore there must be something which 'knows' about the contents or purposes of the arguments. That thing would have to be more than just a basic type, because the basic types are either containers which don't know about their contents, or they are single objects which can't capture their relationship with their fellows of the same type. So, this thing with the extra knowledge should be reified into a class, and the utility method will most likely belong there.
Example
Running Reek on:
class Warehouse
def sale_price(item)
(item.price - item.rebate) * @vat
end
end
would report:
Warehouse#total_price refers to item more than self (FeatureEnvy)
since this:
(item.price - item.rebate)
belongs to the Item class, not the Warehouse.
Plate::Creator#create_plates_from_tube_racks! has approx 13 statements Open
def create_plates_from_tube_racks!(
- Read upRead up
- Exclude checks
A method with Too Many Statements
is any method that has a large number of lines.
Too Many Statements
warns about any method that has more than 5 statements. Reek's smell detector for Too Many Statements
counts +1 for every simple statement in a method and +1 for every statement within a control structure (if
, else
, case
, when
, for
, while
, until
, begin
, rescue
) but it doesn't count the control structure itself.
So the following method would score +6 in Reek's statement-counting algorithm:
def parse(arg, argv, &error)
if !(val = arg) and (argv.empty? or /\A-/ =~ (val = argv[0]))
return nil, block, nil # +1
end
opt = (val = parse_arg(val, &error))[1] # +2
val = conv_arg(*val) # +3
if opt and !arg
argv.shift # +4
else
val[0] = nil # +5
end
val # +6
end
(You might argue that the two assigments within the first @if@ should count as statements, and that perhaps the nested assignment should count as +2.)
Method create_plates_from_tube_racks!
has 5 arguments (exceeds 4 allowed). Consider refactoring. Open
tube_racks,
barcode_printer,
scanned_user,
should_create_asset_group,
_creator_parameters = nil
Method execute
has 5 arguments (exceeds 4 allowed). Consider refactoring. Open
def execute(source_plate_barcodes, barcode_printer, scanned_user, should_create_asset_group, creator_parameters = nil)
Plate::Creator#find_relevant_study calls 'sample.studies' 2 times Open
plate.contained_samples.each { |sample| return sample.studies.first if sample.studies.first }
- Read upRead up
- Exclude checks
Duplication occurs when two fragments of code look nearly identical, or when two fragments of code have nearly identical effects at some conceptual level.
Reek implements a check for Duplicate Method Call.
Example
Here's a very much simplified and contrived example. The following method will report a warning:
def double_thing()
@other.thing + @other.thing
end
One quick approach to silence Reek would be to refactor the code thus:
def double_thing()
thing = @other.thing
thing + thing
end
A slightly different approach would be to replace all calls of double_thing
by calls to @other.double_thing
:
class Other
def double_thing()
thing + thing
end
end
The approach you take will depend on balancing other factors in your code.
Plate::Creator::PlateCreationError has no descriptive comment Open
PlateCreationError = Class.new(StandardError)
- Read upRead up
- Exclude checks
Classes and modules are the units of reuse and release. It is therefore considered good practice to annotate every class and module with a brief comment outlining its responsibilities.
Example
Given
class Dummy
# Do things...
end
Reek would emit the following warning:
test.rb -- 1 warning:
[1]:Dummy has no descriptive comment (IrresponsibleModule)
Fixing this is simple - just an explaining comment:
# The Dummy class is responsible for ...
class Dummy
# Do things...
end
Plate::Creator#find_relevant_study calls 'sample.studies.first' 2 times Open
plate.contained_samples.each { |sample| return sample.studies.first if sample.studies.first }
- Read upRead up
- Exclude checks
Duplication occurs when two fragments of code look nearly identical, or when two fragments of code have nearly identical effects at some conceptual level.
Reek implements a check for Duplicate Method Call.
Example
Here's a very much simplified and contrived example. The following method will report a warning:
def double_thing()
@other.thing + @other.thing
end
One quick approach to silence Reek would be to refactor the code thus:
def double_thing()
thing = @other.thing
thing + thing
end
A slightly different approach would be to replace all calls of double_thing
by calls to @other.double_thing
:
class Other
def double_thing()
thing + thing
end
end
The approach you take will depend on balancing other factors in your code.
Complex method Plate::Creator#execute (22.4) Open
def execute(source_plate_barcodes, barcode_printer, scanned_user, should_create_asset_group, creator_parameters = nil)
@created_plates = []
new_plates = transaction { create_plates(source_plate_barcodes, scanned_user, creator_parameters) }
fail_with_error('Plate creation failed') if new_plates.empty?
- Read upRead up
- Exclude checks
Flog calculates the ABC score for methods. The ABC score is based on assignments, branches (method calls), and conditions.
You can read more about ABC metrics or the flog tool
Plate::Creator#tube_rack_to_plate_factories doesn't depend on instance state (maybe move it to another class?) Open
def tube_rack_to_plate_factories(tube_racks, plate_purpose)
- Read upRead up
- Exclude checks
A Utility Function is any instance method that has no dependency on the state of the instance.
Plate::Creator has missing safe method 'create_plates_from_tube_racks!' Open
def create_plates_from_tube_racks!(
- Read upRead up
- Exclude checks
A candidate method for the Missing Safe Method
smell are methods whose names end with an exclamation mark.
An exclamation mark in method names means (the explanation below is taken from here ):
The ! in method names that end with ! means, “This method is dangerous”—or, more precisely, this method is the “dangerous” version of an otherwise equivalent method, with the same name minus the !. “Danger” is relative; the ! doesn’t mean anything at all unless the method name it’s in corresponds to a similar but bang-less method name. So, for example, gsub! is the dangerous version of gsub. exit! is the dangerous version of exit. flatten! is the dangerous version of flatten. And so forth.
Such a method is called Missing Safe Method
if and only if her non-bang version does not exist and this method is reported as a smell.
Example
Given
class C
def foo; end
def foo!; end
def bar!; end
end
Reek would report bar!
as Missing Safe Method
smell but not foo!
.
Reek reports this smell only in a class context, not in a module context in order to allow perfectly legit code like this:
class Parent
def foo; end
end
module Dangerous
def foo!; end
end
class Son < Parent
include Dangerous
end
class Daughter < Parent
end
In this example, Reek would not report the Missing Safe Method
smell for the method foo
of the Dangerous
module.
Plate::Creator#find_relevant_study doesn't depend on instance state (maybe move it to another class?) Open
def find_relevant_study(created_plates)
- Read upRead up
- Exclude checks
A Utility Function is any instance method that has no dependency on the state of the instance.
Plate::Creator#create_child_plates_from has the variable name 'w' Open
stock_well_picker = plate.plate_purpose.stock_plate? ? ->(w) { [w] } : ->(w) { w.stock_wells }
- Read upRead up
- Exclude checks
An Uncommunicative Variable Name
is a variable name that doesn't communicate its intent well enough.
Poor names make it hard for the reader to build a mental picture of what's going on in the code. They can also be mis-interpreted; and they hurt the flow of reading, because the reader must slow down to interpret the names.