sanger/sequencescape

# frozen_string_literal: true
module StudyReport::AssetDetails
  def qc_report # rubocop:todo Metrics/AbcSize, Metrics/MethodLength
    qc_data = { supplier_volume: 0 }

    sample = primary_aliquot.try(:sample)
    if sample.present?
      supplier_sample_name =
        if sample.empty_supplier_sample_name
          'Blank'
        else
          sample.sample_metadata.supplier_name || sample.sanger_sample_id || sample.name
        end

      qc_data.merge!(
        supplier: sample.sample_manifest.try(:supplier).try(:name),
        sample_name: supplier_sample_name,
        sanger_sample_id: sample.sanger_sample_id,
        control: sample.control,
        status: (sample.updated_by_manifest ? 'Updated by manifest' : 'Awaiting manifest'),
        supplier_gender: sample.sample_metadata.gender,
        cohort: sample.sample_metadata.cohort,
        country_of_origin: sample.sample_metadata.country_of_origin,
        geographical_region: sample.sample_metadata.geographical_region,
        ethnicity: sample.sample_metadata.ethnicity,
        dna_source: sample.sample_metadata.dna_source,
        is_resubmitted: sample.sample_metadata.is_resubmitted
      )
    end

    qc_data
  end
end