sanger/sequencescape

<%# NOTE[xxx]: Kind of a hack because we're not actually building a form %>
<%= fields_for(study) do |form| %>
  <%= form.fields_for(:study_metadata, builder: Metadata::ViewBuilder) do |metadata_fields| %>
    <%= metadata_fields.association_attribute(:faculty_sponsor, :name, grouping: 'Specification') %>
    <%= metadata_fields.association_attribute(:program, :name, grouping: 'Specification') %>
    <%= metadata_fields.plain_value(:prelim_id) %>

    <% metadata_fields.with_options(grouping: 'ENA requirement') do |group| %>
      <%= group.plain_value(:study_study_title) %>
      <%= group.association_attribute(:study_type, :name) %>
      <%= group.plain_value(:study_description) %>
      <%= group.plain_value(:study_abstract) %>
      <%= group.plain_value(:study_sra_hold) %>
    <% end %>

    <%= metadata_fields.plain_value(:contains_human_dna) %>
    <%= metadata_fields.plain_value(:contaminated_human_dna) %>
    <%= metadata_fields.plain_value(:commercially_available) %>
    
    <%= metadata_fields.plain_value(:hmdmc_approval_number) %>

    <%= metadata_fields.plain_value(:remove_x_and_autosomes) %>
    <%= metadata_fields.plain_value(:separate_y_chromosome_data) %>

    <%= metadata_fields.plain_value(:study_project_id, grouping: 'SRA') %>
    <%= metadata_fields.plain_value(:study_ebi_accession_number, grouping: 'SRA AN') %>
    <%= metadata_fields.plain_value(:ega_dac_accession_number) %>
    <%= metadata_fields.plain_value(:ega_policy_accession_number) %>
    <%= metadata_fields.plain_value(:array_express_accession_number) %>
    <%= metadata_fields.plain_value(:study_name_abbreviation) %>
    <%= metadata_fields.plain_value(:bam) %>

    <% metadata_fields.with_options(grouping: 'Data Release') do |group| %>
      <%= metadata_fields.plain_value(:data_access_group) %>
      <%= group.association_attribute(:data_release_study_type, :name) %>
      <%= group.plain_value(:data_release_strategy) %>
      <% if study.study_metadata.managed? %>
        <%= group.plain_value(:data_release_standard_agreement) %>
        <% if study.study_metadata.non_standard_agreement? %>
          <%= group.file(:data_release_non_standard_agreement) %>
        <% end %>
      <% end %>

      <%= group.plain_value(:data_release_timing) %>
      <% if study.study_metadata.delayed_release? %>
        <%= group.plain_value(:data_release_delay_reason) %>
        <% if study.study_metadata.delayed_for_other_reasons? %>
          <%= group.plain_value(:data_release_delay_other_comment) %>
          <%= group.plain_value(:data_release_delay_period) %>
          <% if study.study_metadata.delayed_for_long_time? %>
            <%= group.plain_value(:data_release_delay_approval) %>
            <%= group.plain_value(:data_release_delay_reason_comment) %>
          <% end %>
        <% end %>
      <% elsif study.study_metadata.never_release? %>
        <%= group.plain_value(:data_release_prevention_reason) %>
        <%= group.plain_value(:data_release_prevention_approval) %>
        <%= group.plain_value(:data_release_prevention_reason_comment) %>
      <% end %>
      <%= metadata_fields.plain_value(:dac_policy_title) %>
      <%= metadata_fields.plain_value(:dac_policy) %>
      <%= metadata_fields.plain_value(:contaminated_human_data_access_group) %>
    <% end %>
  <% end %>
<% end %>