sanger/sequencescape

<?xml version="1.0" encoding="UTF-8"?>
<EXPERIMENT_SET>
 <EXPERIMENT alias="egaTest-Experiment7">
   <TITLE>experiment made with the sample fluke.assay1</TITLE>
   <STUDY_REF refname="egaTest-Study7"/>
   <DESIGN>
     <DESIGN_DESCRIPTION>See study and sample descriptions for details</DESIGN_DESCRIPTION>
     <SAMPLE_DESCRIPTOR refname="egaTest-Sample7"/>
     <LIBRARY_DESCRIPTOR>
       <LIBRARY_NAME>test SRA lib</LIBRARY_NAME>
       <LIBRARY_STRATEGY>OTHER</LIBRARY_STRATEGY>
       <LIBRARY_SOURCE>NON GENOMIC</LIBRARY_SOURCE>
       <LIBRARY_SELECTION>cDNA</LIBRARY_SELECTION>
       <LIBRARY_LAYOUT>
         <PAIRED NOMINAL_LENGTH="280" NOMINAL_SDEV="0" ORIENTATION="foo-orientation"/>
       </LIBRARY_LAYOUT>
       <LIBRARY_CONSTRUCTION_PROTOCOL>Info</LIBRARY_CONSTRUCTION_PROTOCOL>
     </LIBRARY_DESCRIPTOR>
     <SPOT_DESCRIPTOR>
       <SPOT_DECODE_SPEC>
         <NUMBER_OF_READS_PER_SPOT>3</NUMBER_OF_READS_PER_SPOT>
         <READ_SPEC>
           <READ_INDEX>0</READ_INDEX>
           <READ_CLASS>Application Read</READ_CLASS>
           <READ_TYPE>Forward</READ_TYPE>
           <BASE_COORD>10</BASE_COORD>
         </READ_SPEC>
         <READ_SPEC>
           <READ_INDEX>1</READ_INDEX>
           <READ_CLASS>Application Read</READ_CLASS>
           <READ_TYPE>BarCode</READ_TYPE>
           <BASE_COORD>10</BASE_COORD>
         </READ_SPEC>
       </SPOT_DECODE_SPEC>
     </SPOT_DESCRIPTOR>
   </DESIGN>
   <PLATFORM>
     <LS454>
       <INSTRUMENT_MODEL>454 GS FLX</INSTRUMENT_MODEL>
       <FLOW_SEQUENCE>2</FLOW_SEQUENCE>
       <FLOW_COUNT>1</FLOW_COUNT>
     </LS454>
   </PLATFORM>
   <PROCESSING>
     <BASE_CALLS>
       <SEQUENCE_SPACE>Base Space</SEQUENCE_SPACE>
       <BASE_CALLER>454 Basecaller</BASE_CALLER>
     </BASE_CALLS>
     <QUALITY_SCORES qtype="phred">
       <QUALITY_SCORER>454 Basecaller</QUALITY_SCORER>
       <NUMBER_OF_LEVELS>1</NUMBER_OF_LEVELS>
       <MULTIPLIER>1.5</MULTIPLIER>
     </QUALITY_SCORES>
     <QUALITY_SCORES>
       <QUALITY_SCORER>454 Basecaller</QUALITY_SCORER>
       <NUMBER_OF_LEVELS>2</NUMBER_OF_LEVELS>
       <MULTIPLIER>2.2</MULTIPLIER>
     </QUALITY_SCORES>
   </PROCESSING>
 </EXPERIMENT>
</EXPERIMENT_SET>