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sanger/sequencescape

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Showing 5,431 of 5,433 total issues

TODO found
Open

  # TODO: Add any instance methods required
Severity: Minor
Found in app/api/model_extensions/barcode_printer.rb by fixme

TODO found
Open

      # TODO[xxx]: Isn't qc_state supposed to be initialised to 'qc_pending' rather than blank?
Severity: Minor
Found in lib/sequencing_qc_batch.rb by fixme

TODO found
Open

  # TODO - Look into this is the person that created it really the owner?
Severity: Minor
Found in app/models/study.rb by fixme

TODO found
Open

    # TODO (jr) Find a better way of verifying the CSV file?
Severity: Minor
Found in app/models/bulk_submission.rb by fixme

TODO found
Open

    name: 'name' # TODO[xxx]: if respond_to?(:name)
Severity: Minor
Found in app/models/api/base.rb by fixme

TODO found
Open

    # set_eager_loading { |model| model }   # TODO: uncomment and add any named_scopes that do includes you need
Severity: Minor
Found in app/api/io/asset_audit.rb by fixme

TODO found
Open

    # TODO: 'association' here should really be garnered from the appropriate endpoint
Severity: Minor
Found in app/api/core/io/base/json_formatting_behaviour.rb by fixme

TODO found
Open

            # TODO: Purpose should be set based on what's selected when generating the manifest
Severity: Minor
Found in app/sample_manifest_excel/sample_manifest_excel/upload/processor/tube_rack.rb by fixme

TODO found
Open

      # TODO: maybe unify this with the previous loop
Severity: Minor
Found in app/models/accessionable/sample.rb by fixme

TODO found
Open

  # TODO: Figure out why eager loading aliquots/samples returns [] even when
Severity: Minor
Found in app/models/order.rb by fixme

TODO found
Open

  # TODO: change column name to account for purpose, not plate_purpose!
Severity: Minor
Found in app/models/tube.rb by fixme

TODO found
Open

                'id' => request.target_asset.primary_aliquot.library_id, # TODO: remove
Severity: Minor
Found in app/views/batches/show.xml.builder by fixme

TODO found
Open

  # TODO: This is currently used from the PhiX::SpikedBuffersController and
Severity: Minor
Found in app/controllers/assets_controller.rb by fixme

TODO found
Open

          # TODO: add any associations
Severity: Minor
Found in app/api/io/asset_audit.rb by fixme

TODO found
Open

  set_eager_loading(&:include_tag) # TODO: uncomment and add any named_scopes that do includes you need
Severity: Minor
Found in app/api/io/tag2_layout_template.rb by fixme

TODO found
Open

      # TODO: had to explicitly specify the namespace for Base here otherwise it picks up Upload::Base
Severity: Minor
Found in app/sample_manifest_excel/sample_manifest_excel/upload/processor/one_d_tube.rb by fixme

TODO found
Open

      # TODO: had to explicitly specify the namespace for Base here otherwise it picks up Upload::Base
Severity: Minor
Found in app/sample_manifest_excel/sample_manifest_excel/upload/processor/plate.rb by fixme

TODO found
Open

  # TODO: This sort will fail and will perform an alphanumeric sort, returning
Severity: Minor
Found in app/models/racked_tube.rb by fixme

TODO found
Open

    # TODO[5002667]: ... to here.
Severity: Minor
Found in app/controllers/projects_controller.rb by fixme

TODO found
Open

    custom_attribute(:purification_method) # TODO[xxx]: tied to the field above?
Severity: Minor
Found in app/models/sample.rb by fixme
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