sanger/sequencescape

A Nested Iterator occurs when a block contains another block.

Example

Given

class Duck
  class << self
    def duck_names
      %i!tick trick track!.each do |surname|
        %i!duck!.each do |last_name|
          puts "full name is #{surname} #{last_name}"
        end
      end
    end
  end
end

Reek would report the following warning:

test.rb -- 1 warning:
  [5]:Duck#duck_names contains iterators nested 2 deep (NestedIterators)

Too Many Methods is a special case of LargeClass.

Example

Given this configuration

TooManyMethods:
  max_methods: 3

and this code:

class TooManyMethods
  def one; end
  def two; end
  def three; end
  def four; end
end

Reek would emit the following warning:

test.rb -- 1 warning:
  [1]:TooManyMethods has at least 4 methods (TooManyMethods)

Control Parameter is a special case of Control Couple

Example

A simple example would be the "quoted" parameter in the following method:

def write(quoted)
  if quoted
    write_quoted @value
  else
    write_unquoted @value
  end
end

Fixing those problems is out of the scope of this document but an easy solution could be to remove the "write" method alltogether and to move the calls to "writequoted" / "writeunquoted" in the initial caller of "write".

Control Parameter is a special case of Control Couple

Example

A simple example would be the "quoted" parameter in the following method:

def write(quoted)
  if quoted
    write_quoted @value
  else
    write_unquoted @value
  end
end

Fixing those problems is out of the scope of this document but an easy solution could be to remove the "write" method alltogether and to move the calls to "writequoted" / "writeunquoted" in the initial caller of "write".

Control Parameter is a special case of Control Couple

Example

A simple example would be the "quoted" parameter in the following method:

def write(quoted)
  if quoted
    write_quoted @value
  else
    write_unquoted @value
  end
end

Fixing those problems is out of the scope of this document but an easy solution could be to remove the "write" method alltogether and to move the calls to "writequoted" / "writeunquoted" in the initial caller of "write".

Control Parameter is a special case of Control Couple

Example

A simple example would be the "quoted" parameter in the following method:

def write(quoted)
  if quoted
    write_quoted @value
  else
    write_unquoted @value
  end
end

Fixing those problems is out of the scope of this document but an easy solution could be to remove the "write" method alltogether and to move the calls to "writequoted" / "writeunquoted" in the initial caller of "write".

Control Parameter is a special case of Control Couple

Example

A simple example would be the "quoted" parameter in the following method:

def write(quoted)
  if quoted
    write_quoted @value
  else
    write_unquoted @value
  end
end

Fixing those problems is out of the scope of this document but an easy solution could be to remove the "write" method alltogether and to move the calls to "writequoted" / "writeunquoted" in the initial caller of "write".

Control Parameter is a special case of Control Couple

Example

A simple example would be the "quoted" parameter in the following method:

def write(quoted)
  if quoted
    write_quoted @value
  else
    write_unquoted @value
  end
end

Fixing those problems is out of the scope of this document but an easy solution could be to remove the "write" method alltogether and to move the calls to "writequoted" / "writeunquoted" in the initial caller of "write".

A Nested Iterator occurs when a block contains another block.

Example

Given

class Duck
  class << self
    def duck_names
      %i!tick trick track!.each do |surname|
        %i!duck!.each do |last_name|
          puts "full name is #{surname} #{last_name}"
        end
      end
    end
  end
end

Reek would report the following warning:

test.rb -- 1 warning:
  [5]:Duck#duck_names contains iterators nested 2 deep (NestedIterators)

Classes should not assume that instance variables are set or present outside of the current class definition.

Good:

class Foo
  def initialize
    @bar = :foo
  end

  def foo?
    @bar == :foo
  end
end

Good as well:

class Foo
  def foo?
    bar == :foo
  end

  def bar
    @bar ||= :foo
  end
end

Bad:

class Foo
  def go_foo!
    @bar = :foo
  end

  def foo?
    @bar == :foo
  end
end

Example

Running Reek on:

class Dummy
  def test
    @ivar
  end
end

would report:

[1]:InstanceVariableAssumption: Dummy assumes too much for instance variable @ivar

Note that this example would trigger this smell warning as well:

class Parent
  def initialize(omg)
    @omg = omg
  end
end

class Child < Parent
  def foo
    @omg
  end
end

The way to address the smell warning is that you should create an attr_reader to use @omg in the subclass and not access @omg directly like this:

class Parent
  attr_reader :omg

  def initialize(omg)
    @omg = omg
  end
end

class Child < Parent
  def foo
    omg
  end
end

Directly accessing instance variables is considered a smell because it breaks encapsulation and makes it harder to reason about code.

If you don't want to expose those methods as public API just make them private like this:

class Parent
  def initialize(omg)
    @omg = omg
  end

  private
  attr_reader :omg
end

class Child < Parent
  def foo
    omg
  end
end

Current Support in Reek

An instance variable must:

• be set in the constructor
• or be accessed through a method with lazy initialization / memoization.

If not, Instance Variable Assumption will be reported.

Classes should not assume that instance variables are set or present outside of the current class definition.

Good:

class Foo
  def initialize
    @bar = :foo
  end

  def foo?
    @bar == :foo
  end
end

Good as well:

class Foo
  def foo?
    bar == :foo
  end

  def bar
    @bar ||= :foo
  end
end

Bad:

class Foo
  def go_foo!
    @bar = :foo
  end

  def foo?
    @bar == :foo
  end
end

Example

Running Reek on:

class Dummy
  def test
    @ivar
  end
end

would report:

[1]:InstanceVariableAssumption: Dummy assumes too much for instance variable @ivar

Note that this example would trigger this smell warning as well:

class Parent
  def initialize(omg)
    @omg = omg
  end
end

class Child < Parent
  def foo
    @omg
  end
end

The way to address the smell warning is that you should create an attr_reader to use @omg in the subclass and not access @omg directly like this:

class Parent
  attr_reader :omg

  def initialize(omg)
    @omg = omg
  end
end

class Child < Parent
  def foo
    omg
  end
end

Directly accessing instance variables is considered a smell because it breaks encapsulation and makes it harder to reason about code.

If you don't want to expose those methods as public API just make them private like this:

class Parent
  def initialize(omg)
    @omg = omg
  end

  private
  attr_reader :omg
end

class Child < Parent
  def foo
    omg
  end
end

Current Support in Reek

An instance variable must:

• be set in the constructor
• or be accessed through a method with lazy initialization / memoization.

If not, Instance Variable Assumption will be reported.

Classes should not assume that instance variables are set or present outside of the current class definition.

Good:

class Foo
  def initialize
    @bar = :foo
  end

  def foo?
    @bar == :foo
  end
end

Good as well:

class Foo
  def foo?
    bar == :foo
  end

  def bar
    @bar ||= :foo
  end
end

Bad:

class Foo
  def go_foo!
    @bar = :foo
  end

  def foo?
    @bar == :foo
  end
end

Example

Running Reek on:

class Dummy
  def test
    @ivar
  end
end

would report:

[1]:InstanceVariableAssumption: Dummy assumes too much for instance variable @ivar

Note that this example would trigger this smell warning as well:

class Parent
  def initialize(omg)
    @omg = omg
  end
end

class Child < Parent
  def foo
    @omg
  end
end

The way to address the smell warning is that you should create an attr_reader to use @omg in the subclass and not access @omg directly like this:

class Parent
  attr_reader :omg

  def initialize(omg)
    @omg = omg
  end
end

class Child < Parent
  def foo
    omg
  end
end

Directly accessing instance variables is considered a smell because it breaks encapsulation and makes it harder to reason about code.

If you don't want to expose those methods as public API just make them private like this:

class Parent
  def initialize(omg)
    @omg = omg
  end

  private
  attr_reader :omg
end

class Child < Parent
  def foo
    omg
  end
end

Current Support in Reek

An instance variable must:

• be set in the constructor
• or be accessed through a method with lazy initialization / memoization.

If not, Instance Variable Assumption will be reported.

Classes should not assume that instance variables are set or present outside of the current class definition.

Good:

class Foo
  def initialize
    @bar = :foo
  end

  def foo?
    @bar == :foo
  end
end

Good as well:

class Foo
  def foo?
    bar == :foo
  end

  def bar
    @bar ||= :foo
  end
end

Bad:

class Foo
  def go_foo!
    @bar = :foo
  end

  def foo?
    @bar == :foo
  end
end

Example

Running Reek on:

class Dummy
  def test
    @ivar
  end
end

would report:

[1]:InstanceVariableAssumption: Dummy assumes too much for instance variable @ivar

Note that this example would trigger this smell warning as well:

class Parent
  def initialize(omg)
    @omg = omg
  end
end

class Child < Parent
  def foo
    @omg
  end
end

The way to address the smell warning is that you should create an attr_reader to use @omg in the subclass and not access @omg directly like this:

class Parent
  attr_reader :omg

  def initialize(omg)
    @omg = omg
  end
end

class Child < Parent
  def foo
    omg
  end
end

Directly accessing instance variables is considered a smell because it breaks encapsulation and makes it harder to reason about code.

If you don't want to expose those methods as public API just make them private like this:

class Parent
  def initialize(omg)
    @omg = omg
  end

  private
  attr_reader :omg
end

class Child < Parent
  def foo
    omg
  end
end

Current Support in Reek

An instance variable must:

• be set in the constructor
• or be accessed through a method with lazy initialization / memoization.

If not, Instance Variable Assumption will be reported.

Duplication occurs when two fragments of code look nearly identical, or when two fragments of code have nearly identical effects at some conceptual level.

Reek implements a check for Duplicate Method Call.

Example

Here's a very much simplified and contrived example. The following method will report a warning:

def double_thing()
  @other.thing + @other.thing
end

One quick approach to silence Reek would be to refactor the code thus:

def double_thing()
  thing = @other.thing
  thing + thing
end

A slightly different approach would be to replace all calls of double_thing by calls to @other.double_thing:

class Other
  def double_thing()
    thing + thing
  end
end

The approach you take will depend on balancing other factors in your code.

Classes should not assume that instance variables are set or present outside of the current class definition.

Good:

class Foo
  def initialize
    @bar = :foo
  end

  def foo?
    @bar == :foo
  end
end

Good as well:

class Foo
  def foo?
    bar == :foo
  end

  def bar
    @bar ||= :foo
  end
end

Bad:

class Foo
  def go_foo!
    @bar = :foo
  end

  def foo?
    @bar == :foo
  end
end

Example

Running Reek on:

class Dummy
  def test
    @ivar
  end
end

would report:

[1]:InstanceVariableAssumption: Dummy assumes too much for instance variable @ivar

Note that this example would trigger this smell warning as well:

class Parent
  def initialize(omg)
    @omg = omg
  end
end

class Child < Parent
  def foo
    @omg
  end
end

The way to address the smell warning is that you should create an attr_reader to use @omg in the subclass and not access @omg directly like this:

class Parent
  attr_reader :omg

  def initialize(omg)
    @omg = omg
  end
end

class Child < Parent
  def foo
    omg
  end
end

Directly accessing instance variables is considered a smell because it breaks encapsulation and makes it harder to reason about code.

If you don't want to expose those methods as public API just make them private like this:

class Parent
  def initialize(omg)
    @omg = omg
  end

  private
  attr_reader :omg
end

class Child < Parent
  def foo
    omg
  end
end

Current Support in Reek

An instance variable must:

• be set in the constructor
• or be accessed through a method with lazy initialization / memoization.

If not, Instance Variable Assumption will be reported.

Classes should not assume that instance variables are set or present outside of the current class definition.

Good:

class Foo
  def initialize
    @bar = :foo
  end

  def foo?
    @bar == :foo
  end
end

Good as well:

class Foo
  def foo?
    bar == :foo
  end

  def bar
    @bar ||= :foo
  end
end

Bad:

class Foo
  def go_foo!
    @bar = :foo
  end

  def foo?
    @bar == :foo
  end
end

Example

Running Reek on:

class Dummy
  def test
    @ivar
  end
end

would report:

[1]:InstanceVariableAssumption: Dummy assumes too much for instance variable @ivar

Note that this example would trigger this smell warning as well:

class Parent
  def initialize(omg)
    @omg = omg
  end
end

class Child < Parent
  def foo
    @omg
  end
end

The way to address the smell warning is that you should create an attr_reader to use @omg in the subclass and not access @omg directly like this:

class Parent
  attr_reader :omg

  def initialize(omg)
    @omg = omg
  end
end

class Child < Parent
  def foo
    omg
  end
end

Directly accessing instance variables is considered a smell because it breaks encapsulation and makes it harder to reason about code.

If you don't want to expose those methods as public API just make them private like this:

class Parent
  def initialize(omg)
    @omg = omg
  end

  private
  attr_reader :omg
end

class Child < Parent
  def foo
    omg
  end
end

Current Support in Reek

An instance variable must:

• be set in the constructor
• or be accessed through a method with lazy initialization / memoization.

If not, Instance Variable Assumption will be reported.

A class that publishes a setter for an instance variable invites client classes to become too intimate with its inner workings, and in particular with its representation of state.

The same holds to a lesser extent for getters, but Reek doesn't flag those.

Example

Given:

class Klass
  attr_accessor :dummy
end

Reek would emit the following warning:

reek test.rb

test.rb -- 1 warning:
  [2]:Klass declares the writable attribute dummy (Attribute)

A candidate method for the Missing Safe Method smell are methods whose names end with an exclamation mark.

An exclamation mark in method names means (the explanation below is taken from here ):

The ! in method names that end with ! means, “This method is dangerous”—or, more precisely, this method is the “dangerous” version of an otherwise equivalent method, with the same name minus the !. “Danger” is relative; the ! doesn’t mean anything at all unless the method name it’s in corresponds to a similar but bang-less method name. So, for example, gsub! is the dangerous version of gsub. exit! is the dangerous version of exit. flatten! is the dangerous version of flatten. And so forth.

Such a method is called Missing Safe Method if and only if her non-bang version does not exist and this method is reported as a smell.

Example

Given

class C
  def foo; end
  def foo!; end
  def bar!; end
end

Reek would report bar! as Missing Safe Method smell but not foo!.

Reek reports this smell only in a class context, not in a module context in order to allow perfectly legit code like this:

class Parent
  def foo; end
end

module Dangerous
  def foo!; end
end

class Son < Parent
  include Dangerous
end

class Daughter < Parent
end

In this example, Reek would not report the Missing Safe Method smell for the method foo of the Dangerous module.

A class that publishes a setter for an instance variable invites client classes to become too intimate with its inner workings, and in particular with its representation of state.

The same holds to a lesser extent for getters, but Reek doesn't flag those.

Example

Given:

class Klass
  attr_accessor :dummy
end

Reek would emit the following warning:

reek test.rb

test.rb -- 1 warning:
  [2]:Klass declares the writable attribute dummy (Attribute)

A class that publishes a setter for an instance variable invites client classes to become too intimate with its inner workings, and in particular with its representation of state.

The same holds to a lesser extent for getters, but Reek doesn't flag those.

Example

Given:

class Klass
  attr_accessor :dummy
end

Reek would emit the following warning:

reek test.rb

test.rb -- 1 warning:
  [2]:Klass declares the writable attribute dummy (Attribute)

A class that publishes a setter for an instance variable invites client classes to become too intimate with its inner workings, and in particular with its representation of state.

The same holds to a lesser extent for getters, but Reek doesn't flag those.

Example

Given:

class Klass
  attr_accessor :dummy
end

Reek would emit the following warning:

reek test.rb

test.rb -- 1 warning:
  [2]:Klass declares the writable attribute dummy (Attribute)

A class that publishes a setter for an instance variable invites client classes to become too intimate with its inner workings, and in particular with its representation of state.

The same holds to a lesser extent for getters, but Reek doesn't flag those.

Example

Given:

class Klass
  attr_accessor :dummy
end

Reek would emit the following warning:

reek test.rb

test.rb -- 1 warning:
  [2]:Klass declares the writable attribute dummy (Attribute)

A Utility Function is any instance method that has no dependency on the state of the instance.

A class that publishes a setter for an instance variable invites client classes to become too intimate with its inner workings, and in particular with its representation of state.

The same holds to a lesser extent for getters, but Reek doesn't flag those.

Example

Given:

class Klass
  attr_accessor :dummy
end

Reek would emit the following warning:

reek test.rb

test.rb -- 1 warning:
  [2]:Klass declares the writable attribute dummy (Attribute)

A class that publishes a setter for an instance variable invites client classes to become too intimate with its inner workings, and in particular with its representation of state.

The same holds to a lesser extent for getters, but Reek doesn't flag those.

Example

Given:

class Klass
  attr_accessor :dummy
end

Reek would emit the following warning:

reek test.rb

test.rb -- 1 warning:
  [2]:Klass declares the writable attribute dummy (Attribute)

A class that publishes a setter for an instance variable invites client classes to become too intimate with its inner workings, and in particular with its representation of state.

The same holds to a lesser extent for getters, but Reek doesn't flag those.

Example

Given:

class Klass
  attr_accessor :dummy
end

Reek would emit the following warning:

reek test.rb

test.rb -- 1 warning:
  [2]:Klass declares the writable attribute dummy (Attribute)

A Utility Function is any instance method that has no dependency on the state of the instance.

A class that publishes a setter for an instance variable invites client classes to become too intimate with its inner workings, and in particular with its representation of state.

The same holds to a lesser extent for getters, but Reek doesn't flag those.

Example

Given:

class Klass
  attr_accessor :dummy
end

Reek would emit the following warning:

reek test.rb

test.rb -- 1 warning:
  [2]:Klass declares the writable attribute dummy (Attribute)

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 33.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

• Extract Method
• Extract Class
• Form Template Method
• Introduce Null Object
• Pull Up Method
• Pull Up Field
• Substitute Algorithm

Further Reading

• Don't Repeat Yourself on the C2 Wiki
• Duplicated Code on SourceMaking
• Refactoring: Improving the Design of Existing Code by Martin Fowler. Duplicated Code, p76

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 29.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

• Extract Method
• Extract Class
• Form Template Method
• Introduce Null Object
• Pull Up Method
• Pull Up Field
• Substitute Algorithm

Further Reading

• Don't Repeat Yourself on the C2 Wiki
• Duplicated Code on SourceMaking
• Refactoring: Improving the Design of Existing Code by Martin Fowler. Duplicated Code, p76