sanger/sequencescape

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lib/mbrave_tags_creator.rb

Summary

Maintainability
A
35 mins
Test Coverage
F
0%

Complex method MbraveTagsCreator#create_24_tag_groups_reverse (39.2)
Open

  def create_24_tag_groups_reverse
    tags = []
    mbrave_tags = []
    group = 1
    log_line { "Creating reverse tags from: #{reverse_filename}" }
Severity: Minor
Found in lib/mbrave_tags_creator.rb by flog

Flog calculates the ABC score for methods. The ABC score is based on assignments, branches (method calls), and conditions.

You can read more about ABC metrics or the flog tool

Complex method MbraveTagsCreator::StaticMethods#create_tag_plates (28.5)
Open

    def create_tag_plates(tag_layout_templates, user) # rubocop:todo Metrics/MethodLength
      ActiveRecord::Base.transaction do
        lot_type = LotType.find_by!(name: 'Pre Stamped Tags - 384')
        tag_layout_templates.each_with_index do |tag_layout_template, _index|
          lot =
Severity: Minor
Found in lib/mbrave_tags_creator.rb by flog

Flog calculates the ABC score for methods. The ABC score is based on assignments, branches (method calls), and conditions.

You can read more about ABC metrics or the flog tool

MbraveTagsCreator#_add_to_yaml refers to 'record' more than self (maybe move it to another class?)
Open

    record['name'] = tag_group_name
    record['version'] = version
    record['num_plate'] = num_plate
    record['tags'] = mbrave_tags
Severity: Minor
Found in lib/mbrave_tags_creator.rb by reek

Feature Envy occurs when a code fragment references another object more often than it references itself, or when several clients do the same series of manipulations on a particular type of object.

Feature Envy reduces the code's ability to communicate intent: code that "belongs" on one class but which is located in another can be hard to find, and may upset the "System of Names" in the host class.

Feature Envy also affects the design's flexibility: A code fragment that is in the wrong class creates couplings that may not be natural within the application's domain, and creates a loss of cohesion in the unwilling host class.

Feature Envy often arises because it must manipulate other objects (usually its arguments) to get them into a useful form, and one force preventing them (the arguments) doing this themselves is that the common knowledge lives outside the arguments, or the arguments are of too basic a type to justify extending that type. Therefore there must be something which 'knows' about the contents or purposes of the arguments. That thing would have to be more than just a basic type, because the basic types are either containers which don't know about their contents, or they are single objects which can't capture their relationship with their fellows of the same type. So, this thing with the extra knowledge should be reified into a class, and the utility method will most likely belong there.

Example

Running Reek on:

class Warehouse
  def sale_price(item)
    (item.price - item.rebate) * @vat
  end
end

would report:

Warehouse#total_price refers to item more than self (FeatureEnvy)

since this:

(item.price - item.rebate)

belongs to the Item class, not the Warehouse.

MbraveTagsCreator::StaticMethods#create_tag_plates has approx 13 statements
Open

    def create_tag_plates(tag_layout_templates, user) # rubocop:todo Metrics/MethodLength
Severity: Minor
Found in lib/mbrave_tags_creator.rb by reek

A method with Too Many Statements is any method that has a large number of lines.

Too Many Statements warns about any method that has more than 5 statements. Reek's smell detector for Too Many Statements counts +1 for every simple statement in a method and +1 for every statement within a control structure (if, else, case, when, for, while, until, begin, rescue) but it doesn't count the control structure itself.

So the following method would score +6 in Reek's statement-counting algorithm:

def parse(arg, argv, &error)
  if !(val = arg) and (argv.empty? or /\A-/ =~ (val = argv[0]))
    return nil, block, nil                                         # +1
  end
  opt = (val = parse_arg(val, &error))[1]                          # +2
  val = conv_arg(*val)                                             # +3
  if opt and !arg
    argv.shift                                                     # +4
  else
    val[0] = nil                                                   # +5
  end
  val                                                              # +6
end

(You might argue that the two assigments within the first @if@ should count as statements, and that perhaps the nested assignment should count as +2.)

MbraveTagsCreator#_add_to_yaml has 5 parameters
Open

  def _add_to_yaml(_yaml_filename, tag_group_name, mbrave_tags, version, num_plate)
Severity: Minor
Found in lib/mbrave_tags_creator.rb by reek

A Long Parameter List occurs when a method has a lot of parameters.

Example

Given

class Dummy
  def long_list(foo,bar,baz,fling,flung)
    puts foo,bar,baz,fling,flung
  end
end

Reek would report the following warning:

test.rb -- 1 warning:
  [2]:Dummy#long_list has 5 parameters (LongParameterList)

A common solution to this problem would be the introduction of parameter objects.

MbraveTagsCreator#_add_to_yaml has approx 6 statements
Open

  def _add_to_yaml(_yaml_filename, tag_group_name, mbrave_tags, version, num_plate)
Severity: Minor
Found in lib/mbrave_tags_creator.rb by reek

A method with Too Many Statements is any method that has a large number of lines.

Too Many Statements warns about any method that has more than 5 statements. Reek's smell detector for Too Many Statements counts +1 for every simple statement in a method and +1 for every statement within a control structure (if, else, case, when, for, while, until, begin, rescue) but it doesn't count the control structure itself.

So the following method would score +6 in Reek's statement-counting algorithm:

def parse(arg, argv, &error)
  if !(val = arg) and (argv.empty? or /\A-/ =~ (val = argv[0]))
    return nil, block, nil                                         # +1
  end
  opt = (val = parse_arg(val, &error))[1]                          # +2
  val = conv_arg(*val)                                             # +3
  if opt and !arg
    argv.shift                                                     # +4
  else
    val[0] = nil                                                   # +5
  end
  val                                                              # +6
end

(You might argue that the two assigments within the first @if@ should count as statements, and that perhaps the nested assignment should count as +2.)

MbraveTagsCreator has at least 8 instance variables
Open

class MbraveTagsCreator
Severity: Minor
Found in lib/mbrave_tags_creator.rb by reek

Too Many Instance Variables is a special case of LargeClass.

Example

Given this configuration

TooManyInstanceVariables:
  max_instance_variables: 3

and this code:

class TooManyInstanceVariables
  def initialize
    @arg_1 = :dummy
    @arg_2 = :dummy
    @arg_3 = :dummy
    @arg_4 = :dummy
  end
end

Reek would emit the following warning:

test.rb -- 5 warnings:
  [1]:TooManyInstanceVariables has at least 4 instance variables (TooManyInstanceVariables)

MbraveTagsCreator#create_24_tag_groups_reverse has approx 19 statements
Open

  def create_24_tag_groups_reverse
Severity: Minor
Found in lib/mbrave_tags_creator.rb by reek

A method with Too Many Statements is any method that has a large number of lines.

Too Many Statements warns about any method that has more than 5 statements. Reek's smell detector for Too Many Statements counts +1 for every simple statement in a method and +1 for every statement within a control structure (if, else, case, when, for, while, until, begin, rescue) but it doesn't count the control structure itself.

So the following method would score +6 in Reek's statement-counting algorithm:

def parse(arg, argv, &error)
  if !(val = arg) and (argv.empty? or /\A-/ =~ (val = argv[0]))
    return nil, block, nil                                         # +1
  end
  opt = (val = parse_arg(val, &error))[1]                          # +2
  val = conv_arg(*val)                                             # +3
  if opt and !arg
    argv.shift                                                     # +4
  else
    val[0] = nil                                                   # +5
  end
  val                                                              # +6
end

(You might argue that the two assigments within the first @if@ should count as statements, and that perhaps the nested assignment should count as +2.)

MbraveTagsCreator#write_yaml has approx 9 statements
Open

  def write_yaml(yaml_filename)
Severity: Minor
Found in lib/mbrave_tags_creator.rb by reek

A method with Too Many Statements is any method that has a large number of lines.

Too Many Statements warns about any method that has more than 5 statements. Reek's smell detector for Too Many Statements counts +1 for every simple statement in a method and +1 for every statement within a control structure (if, else, case, when, for, while, until, begin, rescue) but it doesn't count the control structure itself.

So the following method would score +6 in Reek's statement-counting algorithm:

def parse(arg, argv, &error)
  if !(val = arg) and (argv.empty? or /\A-/ =~ (val = argv[0]))
    return nil, block, nil                                         # +1
  end
  opt = (val = parse_arg(val, &error))[1]                          # +2
  val = conv_arg(*val)                                             # +3
  if opt and !arg
    argv.shift                                                     # +4
  else
    val[0] = nil                                                   # +5
  end
  val                                                              # +6
end

(You might argue that the two assigments within the first @if@ should count as statements, and that perhaps the nested assignment should count as +2.)

MbraveTagsCreator#create_1_tag_group_forward has approx 12 statements
Open

  def create_1_tag_group_forward
Severity: Minor
Found in lib/mbrave_tags_creator.rb by reek

A method with Too Many Statements is any method that has a large number of lines.

Too Many Statements warns about any method that has more than 5 statements. Reek's smell detector for Too Many Statements counts +1 for every simple statement in a method and +1 for every statement within a control structure (if, else, case, when, for, while, until, begin, rescue) but it doesn't count the control structure itself.

So the following method would score +6 in Reek's statement-counting algorithm:

def parse(arg, argv, &error)
  if !(val = arg) and (argv.empty? or /\A-/ =~ (val = argv[0]))
    return nil, block, nil                                         # +1
  end
  opt = (val = parse_arg(val, &error))[1]                          # +2
  val = conv_arg(*val)                                             # +3
  if opt and !arg
    argv.shift                                                     # +4
  else
    val[0] = nil                                                   # +5
  end
  val                                                              # +6
end

(You might argue that the two assigments within the first @if@ should count as statements, and that perhaps the nested assignment should count as +2.)

MbraveTagsCreator#create_tag_layout_templates has approx 6 statements
Open

  def create_tag_layout_templates
Severity: Minor
Found in lib/mbrave_tags_creator.rb by reek

A method with Too Many Statements is any method that has a large number of lines.

Too Many Statements warns about any method that has more than 5 statements. Reek's smell detector for Too Many Statements counts +1 for every simple statement in a method and +1 for every statement within a control structure (if, else, case, when, for, while, until, begin, rescue) but it doesn't count the control structure itself.

So the following method would score +6 in Reek's statement-counting algorithm:

def parse(arg, argv, &error)
  if !(val = arg) and (argv.empty? or /\A-/ =~ (val = argv[0]))
    return nil, block, nil                                         # +1
  end
  opt = (val = parse_arg(val, &error))[1]                          # +2
  val = conv_arg(*val)                                             # +3
  if opt and !arg
    argv.shift                                                     # +4
  else
    val[0] = nil                                                   # +5
  end
  val                                                              # +6
end

(You might argue that the two assigments within the first @if@ should count as statements, and that perhaps the nested assignment should count as +2.)

MbraveTagsCreator::StaticMethods#process_create_tag_groups has approx 6 statements
Open

    def process_create_tag_groups(forward_filename, reverse_filename, version)
Severity: Minor
Found in lib/mbrave_tags_creator.rb by reek

A method with Too Many Statements is any method that has a large number of lines.

Too Many Statements warns about any method that has more than 5 statements. Reek's smell detector for Too Many Statements counts +1 for every simple statement in a method and +1 for every statement within a control structure (if, else, case, when, for, while, until, begin, rescue) but it doesn't count the control structure itself.

So the following method would score +6 in Reek's statement-counting algorithm:

def parse(arg, argv, &error)
  if !(val = arg) and (argv.empty? or /\A-/ =~ (val = argv[0]))
    return nil, block, nil                                         # +1
  end
  opt = (val = parse_arg(val, &error))[1]                          # +2
  val = conv_arg(*val)                                             # +3
  if opt and !arg
    argv.shift                                                     # +4
  else
    val[0] = nil                                                   # +5
  end
  val                                                              # +6
end

(You might argue that the two assigments within the first @if@ should count as statements, and that perhaps the nested assignment should count as +2.)

MbraveTagsCreator::StaticMethods#create_tag_plates contains iterators nested 2 deep
Open

            log_line { "#{tag_layout_template.name}:" }
            log_line { " - #{plate_barcode.barcode}" } # barcode string
Severity: Minor
Found in lib/mbrave_tags_creator.rb by reek

A Nested Iterator occurs when a block contains another block.

Example

Given

class Duck
  class << self
    def duck_names
      %i!tick trick track!.each do |surname|
        %i!duck!.each do |last_name|
          puts "full name is #{surname} #{last_name}"
        end
      end
    end
  end
end

Reek would report the following warning:

test.rb -- 1 warning:
  [5]:Duck#duck_names contains iterators nested 2 deep (NestedIterators)

Method _add_to_yaml has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

  def _add_to_yaml(_yaml_filename, tag_group_name, mbrave_tags, version, num_plate)
Severity: Minor
Found in lib/mbrave_tags_creator.rb - About 35 mins to fix

    MbraveTagsCreator::StaticMethods has no descriptive comment
    Open

      module StaticMethods
    Severity: Minor
    Found in lib/mbrave_tags_creator.rb by reek

    Classes and modules are the units of reuse and release. It is therefore considered good practice to annotate every class and module with a brief comment outlining its responsibilities.

    Example

    Given

    class Dummy
      # Do things...
    end

    Reek would emit the following warning:

    test.rb -- 1 warning:
      [1]:Dummy has no descriptive comment (IrresponsibleModule)

    Fixing this is simple - just an explaining comment:

    # The Dummy class is responsible for ...
    class Dummy
      # Do things...
    end

    MbraveTagsCreator#create_tag_layout_templates calls 'tag_layout_template_name(index)' 2 times
    Open

          log_line { " - #{tag_layout_template_name(index)}" }
          TagLayoutTemplate.create(
            name: tag_layout_template_name(index),
    Severity: Minor
    Found in lib/mbrave_tags_creator.rb by reek

    Duplication occurs when two fragments of code look nearly identical, or when two fragments of code have nearly identical effects at some conceptual level.

    Reek implements a check for Duplicate Method Call.

    Example

    Here's a very much simplified and contrived example. The following method will report a warning:

    def double_thing()
      @other.thing + @other.thing
    end

    One quick approach to silence Reek would be to refactor the code thus:

    def double_thing()
      thing = @other.thing
      thing + thing
    end

    A slightly different approach would be to replace all calls of double_thing by calls to @other.double_thing:

    class Other
      def double_thing()
        thing + thing
      end
    end

    The approach you take will depend on balancing other factors in your code.

    MbraveTagsCreator::StaticMethods#create_tag_plates calls 'Time.current' 2 times
    Open

                  lot_number: "PSD_#{Time.current.to_f}",
                  template: tag_layout_template,
                  user: user,
                  received_at: Time.current
    Severity: Minor
    Found in lib/mbrave_tags_creator.rb by reek

    Duplication occurs when two fragments of code look nearly identical, or when two fragments of code have nearly identical effects at some conceptual level.

    Reek implements a check for Duplicate Method Call.

    Example

    Here's a very much simplified and contrived example. The following method will report a warning:

    def double_thing()
      @other.thing + @other.thing
    end

    One quick approach to silence Reek would be to refactor the code thus:

    def double_thing()
      thing = @other.thing
      thing + thing
    end

    A slightly different approach would be to replace all calls of double_thing by calls to @other.double_thing:

    class Other
      def double_thing()
        thing + thing
      end
    end

    The approach you take will depend on balancing other factors in your code.

    MbraveTagsCreator#create_24_tag_groups_reverse calls 'reverse_tag_group_name(group)' 3 times
    Open

            log_line { " - #{reverse_tag_group_name(group)}" }
            @reverse_groups.push(_create_tag_group(reverse_tag_group_name(group), tags))
            _add_to_yaml(yaml_filename, reverse_tag_group_name(group), mbrave_tags, version, group)
    Severity: Minor
    Found in lib/mbrave_tags_creator.rb by reek

    Duplication occurs when two fragments of code look nearly identical, or when two fragments of code have nearly identical effects at some conceptual level.

    Reek implements a check for Duplicate Method Call.

    Example

    Here's a very much simplified and contrived example. The following method will report a warning:

    def double_thing()
      @other.thing + @other.thing
    end

    One quick approach to silence Reek would be to refactor the code thus:

    def double_thing()
      thing = @other.thing
      thing + thing
    end

    A slightly different approach would be to replace all calls of double_thing by calls to @other.double_thing:

    class Other
      def double_thing()
        thing + thing
      end
    end

    The approach you take will depend on balancing other factors in your code.

    Complex method MbraveTagsCreator#create_1_tag_group_forward (21.9)
    Open

      def create_1_tag_group_forward
        tags = []
        mbrave_tags = []
        log_line { "Creating forward_tags from: #{forward_filename}" }
        CSV.foreach(forward_filename, headers: true) do |row|
    Severity: Minor
    Found in lib/mbrave_tags_creator.rb by flog

    Flog calculates the ABC score for methods. The ABC score is based on assignments, branches (method calls), and conditions.

    You can read more about ABC metrics or the flog tool

    MbraveTagsCreator::StaticMethods#process_create_tag_groups doesn't depend on instance state (maybe move it to another class?)
    Open

        def process_create_tag_groups(forward_filename, reverse_filename, version)
    Severity: Minor
    Found in lib/mbrave_tags_creator.rb by reek

    A Utility Function is any instance method that has no dependency on the state of the instance.

    MbraveTagsCreator::StaticMethods#text_code_for_tag_layout doesn't depend on instance state (maybe move it to another class?)
    Open

        def text_code_for_tag_layout(tag_layout_template)
    Severity: Minor
    Found in lib/mbrave_tags_creator.rb by reek

    A Utility Function is any instance method that has no dependency on the state of the instance.

    There are no issues that match your filters.

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