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| .github/workflows/docs.yml | |
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| .gitignore | |
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| .travis.yml | |
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| genomepy/__about__.py | 5 | A 0 mins | A 100% |
| genomepy/__init__.py | 49 | A 0 mins | A 100% |
| genomepy/annotation/__init__.py | 438 | A 2 hrs | A 96% |
| genomepy/annotation/mygene.py | 143 | A 0 mins | B 84% |
| genomepy/annotation/sanitize.py | 95 | A 0 mins | A 98% |
| genomepy/annotation/utils.py | 142 | A 0 mins | A 93% |
| genomepy/argparse_support.py | 29 | A 0 mins | A 100% |
| genomepy/caching.py | 33 | A 0 mins | B 87% |
| genomepy/config/__init__.py | 43 | A 0 mins | A 96% |
| genomepy/config/default.yaml | |
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| genomepy/exceptions.py | 3 | A 0 mins | A 100% |
| genomepy/files.py | 383 | A 0 mins | A 95% |
| genomepy/functions.py | 370 | A 3 hrs | A 93% |
| genomepy/genome/__init__.py | 150 | A 1 hr | A 100% |
| genomepy/genome/sequences.py | 205 | A 25 mins | A 92% |
| genomepy/online.py | 115 | A 0 mins | A 98% |
| genomepy/plugins/__init__.py | 122 | A 0 mins | A 91% |
| genomepy/plugins/blacklist.py | 49 | A 0 mins | B 83% |
| genomepy/plugins/bowtie2.py | 25 | A 0 mins | A 94% |
| genomepy/plugins/bwa.py | 28 | A 0 mins | A 95% |
| genomepy/plugins/gmap.py | 31 | A 0 mins | A 95% |
| genomepy/plugins/hisat2.py | 53 | A 0 mins | A 96% |
| genomepy/plugins/minimap2.py | 28 | A 0 mins | A 94% |
| genomepy/plugins/star.py | 37 | A 0 mins | A 96% |
| genomepy/providers/__init__.py | 173 | A 0 mins | B 86% |
| genomepy/providers/base.py | 448 | A 0 mins | A 91% |
| genomepy/providers/ensembl.py | 270 | A 0 mins | A 97% |
| genomepy/providers/gencode.py | 238 | A 0 mins | A 90% |
| genomepy/providers/local.py | 94 | A 0 mins | A 98% |
| genomepy/providers/ncbi.py | 272 | A 0 mins | A 90% |
| genomepy/providers/ucsc.py | 515 | A 0 mins | A 92% |
| genomepy/providers/url.py | 116 | A 0 mins | A 91% |
| genomepy/seq.py | 156 | A 0 mins | A 90% |
| genomepy/utils.py | 140 | A 0 mins | A 96% |