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zincware/MDSuite

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mdsuite/database/experiment_database.py

Summary

Maintainability
C
7 hrs
Test Coverage

File experiment_database.py has 347 lines of code (exceeds 250 allowed). Consider refactoring.
Open

"""
MDSuite: A Zincwarecode package.

License
-------
Severity: Minor
Found in mdsuite/database/experiment_database.py - About 4 hrs to fix

    ExperimentDatabase has 21 functions (exceeds 20 allowed). Consider refactoring.
    Open

    class ExperimentDatabase:
    """Experiment Database helper class for lazy access."""

    temperature = LazyProperty()
    time_step = LazyProperty()
    Severity: Minor
    Found in mdsuite/database/experiment_database.py - About 2 hrs to fix

      Function species has a Cognitive Complexity of 7 (exceeds 5 allowed). Consider refactoring.
      Open

          def species(self, value: dict):
        """Save the SpeciesInfo to the SQL database.

        Parameters
        ----------
      Severity: Minor
      Found in mdsuite/database/experiment_database.py - About 35 mins to fix

      Cognitive Complexity

      Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

      A method's cognitive complexity is based on a few simple rules:

      • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
      • Code is considered more complex for each "break in the linear flow of the code"
      • Code is considered more complex when "flow breaking structures are nested"

      Further reading

      Function molecules has a Cognitive Complexity of 6 (exceeds 5 allowed). Consider refactoring.
      Open

          def molecules(self, value):
        """Save the molecules dict to the database."""
        if value is None:
            return
      Severity: Minor
      Found in mdsuite/database/experiment_database.py - About 25 mins to fix

      Cognitive Complexity

      Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

      A method's cognitive complexity is based on a few simple rules:

      • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
      • Code is considered more complex for each "break in the linear flow of the code"
      • Code is considered more complex when "flow breaking structures are nested"

      Further reading

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