File versioneer.py has 1650 lines of code (exceeds 250 allowed). Consider refactoring.

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# Version: 0.29
 
"""The Versioneer - like a rocketeer, but for versions.
 
The Versioneer

Function extract_stim_times_from_neo_data has a Cognitive Complexity of 83 (exceeds 5 allowed). Consider refactoring.

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def extract_stim_times_from_neo_data(blocks, stim_start, stim_end) -> tuple:
    """
    Seeks for the stim_start and stim_end parameters inside the Neo data.
 
    Args:

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File _version.py has 495 lines of code (exceeds 250 allowed). Consider refactoring.

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# This file helps to compute a version number in source trees obtained from
# git-archive tarball (such as those provided by githubs download-from-tag
# feature). Distribution tarballs (built by setup.py sdist) and build
# directories (produced by setup.py build) will contain a much shorter file
# that just contains the computed version number.

File extrafeats.py has 385 lines of code (exceeds 250 allowed). Consider refactoring.

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"""Extracellular features functions"""
 
"""
Copyright (c) 2024, EPFL/Blue Brain Project
 
 

File pyfeatures.py has 374 lines of code (exceeds 250 allowed). Consider refactoring.

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from __future__ import annotations
"""Python implementation of features"""
 
"""
Copyright (c) 2015, Blue Brain Project/EPFL

File api.py has 370 lines of code (exceeds 250 allowed). Consider refactoring.

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"""eFEL Python API functions.
 
This module provides the user-facing Python API of eFEL.
The convenience functions defined here call the underlying 'cppcore' library
to hide the lower level API from the user.

Function get_cmdclass has a Cognitive Complexity of 28 (exceeds 5 allowed). Consider refactoring.

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def get_cmdclass(cmdclass: Optional[Dict[str, Any]] = None):
    """Get the custom setuptools subclasses used by Versioneer.
 
    If the package uses a different cmdclass (e.g. one from numpy), it
    should be provide as an argument.

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Function git_pieces_from_vcs has a Cognitive Complexity of 27 (exceeds 5 allowed). Consider refactoring.

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def git_pieces_from_vcs(
    tag_prefix: str,
    root: str,
    verbose: bool,
    runner: Callable = run_command

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Function git_pieces_from_vcs has a Cognitive Complexity of 27 (exceeds 5 allowed). Consider refactoring.

Open

def git_pieces_from_vcs(
    tag_prefix: str,
    root: str,
    verbose: bool,
    runner: Callable = run_command

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File isi.py has 299 lines of code (exceeds 250 allowed). Consider refactoring.

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"""Features that are depending on the inter-spike intervals."""
from __future__ import annotations
import logging
from typing_extensions import deprecated
import warnings

Function git_versions_from_keywords has a Cognitive Complexity of 19 (exceeds 5 allowed). Consider refactoring.

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def git_versions_from_keywords(
    keywords: Dict[str, str],
    tag_prefix: str,
    verbose: bool,
) -> Dict[str, Any]:

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Function git_versions_from_keywords has a Cognitive Complexity of 19 (exceeds 5 allowed). Consider refactoring.

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def git_versions_from_keywords(
    keywords: Dict[str, str],
    tag_prefix: str,
    verbose: bool,
) -> Dict[str, Any]:

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Function get_versions has a Cognitive Complexity of 19 (exceeds 5 allowed). Consider refactoring.

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def get_versions(verbose: bool = False) -> Dict[str, Any]:
    """Get the project version from whatever source is available.
 
    Returns dict with two keys: 'version' and 'full'.
    """

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Function run_command has a Cognitive Complexity of 18 (exceeds 5 allowed). Consider refactoring.

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def run_command(
    commands: List[str],
    args: List[str],
    cwd: Optional[str] = None,
    verbose: bool = False,

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Function run_command has a Cognitive Complexity of 18 (exceeds 5 allowed). Consider refactoring.

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def run_command(
    commands: List[str],
    args: List[str],
    cwd: Optional[str] = None,
    verbose: bool = False,

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Function git_get_keywords has a Cognitive Complexity of 17 (exceeds 5 allowed). Consider refactoring.

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def git_get_keywords(versionfile_abs: str) -> Dict[str, str]:
    """Extract version information from the given file."""
    # the code embedded in _version.py can just fetch the value of these
    # keywords. When used from setup.py, we don't want to import _version.py,
    # so we do it with a regexp instead. This function is not used from

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Function git_get_keywords has a Cognitive Complexity of 17 (exceeds 5 allowed). Consider refactoring.

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def git_get_keywords(versionfile_abs: str) -> Dict[str, str]:
    """Extract version information from the given file."""
    # the code embedded in _version.py can just fetch the value of these
    # keywords. When used from setup.py, we don't want to import _version.py,
    # so we do it with a regexp instead. This function is not used from

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Function calculate_features has a Cognitive Complexity of 16 (exceeds 5 allowed). Consider refactoring.

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def calculate_features(
    waveforms,
    sampling_frequency,
    upsample=None,
    feature_names=None,

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Function initburst_sahp has a Cognitive Complexity of 16 (exceeds 5 allowed). Consider refactoring.

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def initburst_sahp() -> np.ndarray | None:
    """SlowAHP voltage after initial burst."""
    # Required cpp features
    voltage = get_cpp_feature("voltage")
    time = get_cpp_feature("time")

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Function do_vcs_install has a Cognitive Complexity of 15 (exceeds 5 allowed). Consider refactoring.

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def do_vcs_install(versionfile_source: str, ipy: Optional[str]) -> None:
    """Git-specific installation logic for Versioneer.
 
    For Git, this means creating/changing .gitattributes to mark _version.py
    for export-subst keyword substitution.

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