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Ensembl/ensembl-hive

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Showing 446 of 446 total issues

FIXME found
Open

    my $remaining_job_count = shift @_ || 0;    # FIXME: a better estimate would be $self->claimed_job_count when it is introduced
Severity: Minor
Found in modules/Bio/EnsEMBL/Hive/AnalysisStats.pm by fixme

TODO found
Open

    TODO: implement a "expected_value" test
Severity: Minor
Found in modules/Bio/EnsEMBL/Hive/RunnableDB/SqlHealthcheck.pm by fixme

XXX found
Open

           "debug": XXX
Severity: Minor
Found in modules/Bio/EnsEMBL/Hive/GuestProcess.pm by fixme

FIXME found
Open

    } elsif($driver eq 'pgsql') {   # FIXME! temporary hack
Severity: Minor
Found in modules/Bio/EnsEMBL/Hive/DBSQL/BaseAdaptor.pm by fixme

XXX found
Open

        3. -url $ehive_url job_id XXX. The reference to an existing job from which the parameters will be pulled. It is
Severity: Minor
Found in docs/scripts/standaloneJob.html by fixme

TODO found
Open

        warn "[Job $job_id] $msg\n";    # TODO: integrate the STDERR diagnostic output with LogMessageAdaptor calls in general
Severity: Minor
Found in modules/Bio/EnsEMBL/Hive/DBSQL/AnalysisJobAdaptor.pm by fixme
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