KarrLab/bpforms

View on GitHub
examples/BIOMD0000000005.fasta

Summary

Maintainability
Test Coverage
> cdc2k | cdc2 | P04551
MENYQKVEKIGEGTYGVVYKARHKLSGRIVAMKKIRLEDESEGVPSTAIR
EISLLKEVNDENNRSNCVRLLDILHAESKLYLVFEFLDMDLKKYMDRISE
TGATSLDPRLVQKFTYQLVNGVNFCHSRRIIHRDLKPQNLLIDKEGNLKL
ADFGLARSFGVPLRNYTHEIVTLWYRAPEVLLGSRHYSTGVDIWSVGCIF
AEMIRRSPLFPGDSEIDEIFKIFQVLGTPNEEVWPGVTLLQDYKSTFPRW
KRMDLHKVVPNGEEDAIELLSAMLVYDPAHRISAKRALQQNYLRDFH

> cdc2k-P | cdc2 | P04551 | pT14, pY15, pT167
MENYQKVEKIGEG{AA0038}{AA0039}GVVYKARHKLSGRIVAMKKIRLEDESEGVPSTAIR
EISLLKEVNDENNRSNCVRLLDILHAESKLYLVFEFLDMDLKKYMDRISE
TGATSLDPRLVQKFTYQLVNGVNFCHSRRIIHRDLKPQNLLIDKEGNLKL
ADFGLARSFGVPLRNY{AA0038}HEIVTLWYRAPEVLLGSRHYSTGVDIWSVGCIF
AEMIRRSPLFPGDSEIDEIFKIFQVLGTPNEEVWPGVTLLQDYKSTFPRW
KRMDLHKVVPNGEEDAIELLSAMLVYDPAHRISAKRALQQNYLRDFH

> cyclin | cdc13 | P10815
MTTRRLTRQHLLANTLGNNDENHPSNHIARAKSSLHSSENSLVNGKKATV
SSTNVPKKRHALDDVSNFHNKEGVPLASKNTNVRHTTASVSTRRALEEKS
IIPATDDEPASKKRRQPSVFNSSVPSLPQHLSTKSHSVSTHGVDAFHKDQ
ATIPKKLKKDVDERVVSKDIPKLHRDSVESPESQDWDDLDAEDWADPLMV
SEYVVDIFEYLNELEIETMPSPTYMDRQKELAWKMRGILTDWLIEVHSRF
RLLPETLFLAVNIIDRFLSLRVCSLNKLQLVGIAALFIASKYEEVMCPSV
QNFVYMADGGYDEEEILQAERYILRVLEFNLAYPNPMNFLRRISKADFYD
IQTRTVAKYLVEIGLLDHKLLPYPPSQQCAAAMYLAREMLGRGPWNRNLV
HYSGYEEYQLISVVKKMINYLQKPVQHEAFFKKYASKKFMKASLFVRDWI
KKNSIPLGDDADEDYTFHKQKRIQHDMKDEEW

> p-cyclin | cdc13 | P10815 | pS33, pS34, pS37, pS38, pS41, pS66, pS111
MTTRRLTRQHLLANTLGNNDENHPSNHIARAK{AA0037}{AA0037}LH
{AA0037}{AA0037}EN{AA0037}LVNGKKATVSSTNVPKKRHALDDV
{AA0037}NFHNKEGVPLASKNTNVRHTTASVSTRRALEEKSIIPATDDE
PA{AA0037}KKRRQPSVFNSSVPSLPQHLSTKSHSVSTHGVDAFHKDQ
ATIPKKLKKDVDERVVSKDIPKLHRDSVESPESQDWDDLDAEDWADPLMV
SEYVVDIFEYLNELEIETMPSPTYMDRQKELAWKMRGILTDWLIEVHSRF
RLLPETLFLAVNIIDRFLSLRVCSLNKLQLVGIAALFIASKYEEVMCPSV
QNFVYMADGGYDEEEILQAERYILRVLEFNLAYPNPMNFLRRISKADFYD
IQTRTVAKYLVEIGLLDHKLLPYPPSQQCAAAMYLAREMLGRGPWNRNLV
HYSGYEEYQLISVVKKMINYLQKPVQHEAFFKKYASKKFMKASLFVRDWI
KKNSIPLGDDADEDYTFHKQKRIQHDMKDEEW