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Identical blocks of code found in 2 locations. Consider refactoring.
Open

        return vec.reshape((self.m_max - self.m_min + 1, self.n_max - self.n_min + 1))
Severity: Minor
Found in intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py and 1 other location - About 45 mins to fix
intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 559..559

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 35.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Function __init__ has 6 arguments (exceeds 4 allowed). Consider refactoring.
Open

    def __init__(self, id='', name='', submodel='', value=None, units='', comments=''):
Severity: Minor
Found in intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/model.py - About 45 mins to fix

    Similar blocks of code found in 7 locations. Consider refactoring.
    Open

            t_eval = numpy.linspace(t_0, t_end, int((t_end - t_0) / t_step) + 1)
    Severity: Major
    Found in intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py and 6 other locations - About 45 mins to fix
    intro_to_wc_modeling/cell_modeling/model_composition.py on lines 439..439
    intro_to_wc_modeling/cell_modeling/model_composition.py on lines 594..594
    intro_to_wc_modeling/cell_modeling/model_composition.py on lines 710..710
    intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 248..248
    intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 767..767
    intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 830..830

    Duplicated Code

    Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

    Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

    When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

    Tuning

    This issue has a mass of 35.

    We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

    The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

    If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

    See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

    Refactorings

    Further Reading

    Function __init__ has 6 arguments (exceeds 4 allowed). Consider refactoring.
    Open

        def __init__(self, submodels=None, compartments=None, species=None, reactions=None, parameters=None, references=None):
    Severity: Minor
    Found in intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/model.py - About 45 mins to fix

      Function analyzeResults has 6 arguments (exceeds 4 allowed). Consider refactoring.
      Open

      def analyzeResults(mdl, time, volume, growth, speciesCounts, output_directory):
      Severity: Minor
      Found in intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/submodel_simulation.py - About 45 mins to fix

        Similar blocks of code found in 7 locations. Consider refactoring.
        Open

                t = numpy.linspace(t_0, t_end, int((t_end - t_0) / t_step) + 1)
        Severity: Major
        Found in intro_to_wc_modeling/cell_modeling/model_composition.py and 6 other locations - About 45 mins to fix
        intro_to_wc_modeling/cell_modeling/model_composition.py on lines 594..594
        intro_to_wc_modeling/cell_modeling/model_composition.py on lines 710..710
        intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 248..248
        intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 511..511
        intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 767..767
        intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 830..830

        Duplicated Code

        Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

        Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

        When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

        Tuning

        This issue has a mass of 35.

        We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

        The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

        If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

        See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

        Refactorings

        Further Reading

        Identical blocks of code found in 2 locations. Consider refactoring.
        Open

                part_mat_shape = (self.m_max - self.m_min + 1, self.n_max - self.n_min + 1)
        Severity: Minor
        Found in intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py and 1 other location - About 45 mins to fix
        intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 393..393

        Duplicated Code

        Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

        Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

        When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

        Tuning

        This issue has a mass of 35.

        We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

        The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

        If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

        See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

        Refactorings

        Further Reading

        Function __init__ has 6 arguments (exceeds 4 allowed). Consider refactoring.
        Open

            def __init__(self, k_m=5, k_n=20, gamma_m=numpy.log(2) * 60 / 3, gamma_n=numpy.log(2) / 10, m_0=1, n_0=98):
        Severity: Minor
        Found in intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py - About 45 mins to fix

          Similar blocks of code found in 7 locations. Consider refactoring.
          Open

                  t_hist = numpy.linspace(t_0, t_end, int((t_end - t_0) / t_step) + 1)
          Severity: Major
          Found in intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py and 6 other locations - About 45 mins to fix
          intro_to_wc_modeling/cell_modeling/model_composition.py on lines 439..439
          intro_to_wc_modeling/cell_modeling/model_composition.py on lines 594..594
          intro_to_wc_modeling/cell_modeling/model_composition.py on lines 710..710
          intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 248..248
          intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 511..511
          intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 830..830

          Duplicated Code

          Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

          Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

          When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

          Tuning

          This issue has a mass of 35.

          We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

          The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

          If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

          See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

          Refactorings

          Further Reading

          Function analyzeResults has 6 arguments (exceeds 4 allowed). Consider refactoring.
          Open

          def analyzeResults(mdl, time, volume, growth, speciesCounts, output_directory):
          Severity: Minor
          Found in intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/simulation.py - About 45 mins to fix

            Similar blocks of code found in 2 locations. Consider refactoring.
            Open

                def dm_dt(self, m, n):
        """ Calculate the rate of change of mRNA

        Args:
            m (:obj:`float`): mRNA number (molecules)
            Severity: Minor
            Found in intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py and 1 other location - About 40 mins to fix
            intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 115..125

            Duplicated Code

            Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

            Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

            When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

            Tuning

            This issue has a mass of 34.

            We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

            The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

            If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

            See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

            Refactorings

            Further Reading

            Similar blocks of code found in 2 locations. Consider refactoring.
            Open

                def dn_dt(self, m, n):
        """ Calculate the rate of change of proteins

        Args:
            m (:obj:`float`): mRNA number (molecules)
            Severity: Minor
            Found in intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py and 1 other location - About 40 mins to fix
            intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 103..113

            Duplicated Code

            Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

            Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

            When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

            Tuning

            This issue has a mass of 34.

            We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

            The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

            If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

            See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

            Refactorings

            Further Reading

            Similar blocks of code found in 3 locations. Consider refactoring.
            Open

                    if value_init < 0 or numpy.ceil(value_init) != value_init:
            raise ValueError('`value_init` must be a non-negative integer')  # example of how to format a string
            Severity: Major
            Found in intro_to_wc_modeling/concepts_skills/software_engineering/unit_testing/core.py and 2 other locations - About 40 mins to fix
            intro_to_wc_modeling/concepts_skills/software_engineering/unit_testing/core.py on lines 52..53
            intro_to_wc_modeling/concepts_skills/software_engineering/unit_testing/core.py on lines 117..118

            Duplicated Code

            Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

            Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

            When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

            Tuning

            This issue has a mass of 34.

            We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

            The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

            If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

            See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

            Refactorings

            Further Reading

            Similar blocks of code found in 3 locations. Consider refactoring.
            Open

                    if time_max < 0 or numpy.ceil(time_max) != time_max:
            raise ValueError('`time_max` must be a non-negative integer'
            Severity: Major
            Found in intro_to_wc_modeling/concepts_skills/software_engineering/unit_testing/core.py and 2 other locations - About 40 mins to fix
            intro_to_wc_modeling/concepts_skills/software_engineering/unit_testing/core.py on lines 50..51
            intro_to_wc_modeling/concepts_skills/software_engineering/unit_testing/core.py on lines 52..53

            Duplicated Code

            Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

            Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

            When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

            Tuning

            This issue has a mass of 34.

            We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

            The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

            If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

            See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

            Refactorings

            Further Reading

            Similar blocks of code found in 3 locations. Consider refactoring.
            Open

                    if time_max < 0 or numpy.ceil(time_max) != time_max:
            raise ValueError('`time_max` must be a non-negative integer')
            Severity: Major
            Found in intro_to_wc_modeling/concepts_skills/software_engineering/unit_testing/core.py and 2 other locations - About 40 mins to fix
            intro_to_wc_modeling/concepts_skills/software_engineering/unit_testing/core.py on lines 50..51
            intro_to_wc_modeling/concepts_skills/software_engineering/unit_testing/core.py on lines 117..118

            Duplicated Code

            Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

            Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

            When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

            Tuning

            This issue has a mass of 34.

            We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

            The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

            If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

            See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

            Refactorings

            Further Reading

            Function simulate has 5 arguments (exceeds 4 allowed). Consider refactoring.
            Open

            def simulate(reaction_stochiometries, kinetic_laws, init_copy_number, time_max, time_step):
            Severity: Minor
            Found in intro_to_wc_modeling/cell_modeling/simulation/stochastic.py - About 35 mins to fix

              Similar blocks of code found in 6 locations. Consider refactoring.
              Open

                  analysis.plot(
        model=submdl,
        time=time,
        yDatas={'Volume': volume},
        fileName=os.path.join(output_directory, 'Volume.png')
              Severity: Major
              Found in intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/submodel_simulation.py and 5 other locations - About 35 mins to fix
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/simulation.py on lines 143..147
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/simulation.py on lines 150..154
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/simulation.py on lines 157..161
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/simulation.py on lines 164..168
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/submodel_simulation.py on lines 137..141

              Duplicated Code

              Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

              Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

              When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

              Tuning

              This issue has a mass of 33.

              We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

              The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

              If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

              See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

              Refactorings

              Further Reading

              Similar blocks of code found in 2 locations. Consider refactoring.
              Open

                          axes[0].plot(t, m[:, i_trajectory], color=(gray, gray, gray))
              Severity: Minor
              Found in intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py and 1 other location - About 35 mins to fix
              intro_to_wc_modeling/cell_modeling/simulation/mrna_and_proteins_using_several_methods.py on lines 860..860

              Duplicated Code

              Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

              Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

              When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

              Tuning

              This issue has a mass of 33.

              We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

              The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

              If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

              See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

              Refactorings

              Further Reading

              Similar blocks of code found in 6 locations. Consider refactoring.
              Open

                  analysis.plot(
        model=submdl,
        time=time,
        yDatas={'Growth': growth},
        fileName=os.path.join(output_directory, 'Growth.png')
              Severity: Major
              Found in intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/submodel_simulation.py and 5 other locations - About 35 mins to fix
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/simulation.py on lines 143..147
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/simulation.py on lines 150..154
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/simulation.py on lines 157..161
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/simulation.py on lines 164..168
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/submodel_simulation.py on lines 130..134

              Duplicated Code

              Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

              Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

              When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

              Tuning

              This issue has a mass of 33.

              We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

              The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

              If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

              See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

              Refactorings

              Further Reading

              Similar blocks of code found in 6 locations. Consider refactoring.
              Open

                  analysis.plot(
        model=mdl,
        time=time,
        yDatas={'Volume': volume},
        fileName=os.path.join(output_directory, 'Volume.png')
              Severity: Major
              Found in intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/simulation.py and 5 other locations - About 35 mins to fix
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/simulation.py on lines 150..154
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/simulation.py on lines 157..161
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/simulation.py on lines 164..168
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/submodel_simulation.py on lines 130..134
              intro_to_wc_modeling/cell_modeling/simulation/multi_algorithm/submodel_simulation.py on lines 137..141

              Duplicated Code

              Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

              Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

              When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

              Tuning

              This issue has a mass of 33.

              We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

              The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

              If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

              See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

              Refactorings

              Further Reading

              Severity
              Category
              Status
              Source
              Language