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KarrLab/wc_lang

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wc_lang/sbml/io.py

Summary

Maintainability
A
2 hrs
Test Coverage
A
100%

Function run has a Cognitive Complexity of 14 (exceeds 5 allowed). Consider refactoring.
Open

    def run(cls, sbml_doc):
        """ Import a `wc_lang` model from an SBML-encoded model

        Args:
            sbml_doc (:obj:`libsbml.SBMLDocument`): SBML document with SBML-encoded model
Severity: Minor
Found in wc_lang/sbml/io.py - About 1 hr to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Function run has a Cognitive Complexity of 7 (exceeds 5 allowed). Consider refactoring.
Open

    def run(cls, model):
        """ Encode a `wc_lang` model with at most 1 submodel into SBML

        * Validate model
        * Create SBML document
Severity: Minor
Found in wc_lang/sbml/io.py - About 35 mins to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

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