KarrLab/wc_lang

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NameLines of codeMaintainabilityTest coverage
.circleci/config.yml
.circleci/requirements.txt
.gitignore
.karr_lab_build_utils.yml
LICENSE
MANIFEST.in
README.md
docs/__init__.py0
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docs/about.rst
docs/conf.py92
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docs/index.rst
docs/installation.rst
docs/overview.rst
docs/references.bib
docs/references.rst
docs/requirements.rtd.txt
docs/requirements.txt
docs/tutorial.rst
examples/jupyter_examples/Expression utils demo.ipynb
examples/jupyter_examples/Math expressions.ipynb
migrations/migration_2019_09_20.py68
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migrations/migration_2019_10_10.py38
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migrations/migration_2019_10_11.py13
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migrations/run_custom_migration.py54
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pytest.ini
requirements.txt
setup.cfg
setup.py50
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wc_lang/VERSION
wc_lang/__init__.py16
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wc_lang/__main__.py301
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wc_lang/config/__init__.py1
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wc_lang/config/core.default.cfg
wc_lang/config/core.py73
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wc_lang/config/core.schema.cfg
wc_lang/config/debug.default.cfg
wc_lang/core.py4,254
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wc_lang/grammar/evidences.lark
wc_lang/grammar/identifiers.lark
wc_lang/grammar/reaction_participants.lark
wc_lang/io.py241
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wc_lang/migrations/__init__.py0
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wc_lang/migrations/custom_io_classes.py7
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wc_lang/sbml/__init__.py0
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wc_lang/sbml/io.py208
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wc_lang/sbml/util.py876
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wc_lang/transform/__init__.py11
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wc_lang/transform/change_value.py89
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wc_lang/transform/core.py47
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wc_lang/transform/create_implicit_dfba_ex_rxns.py80
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