File base.py has 2244 lines of code (exceeds 400 allowed). Consider refactoring.

Open

from collections import defaultdict, OrderedDict
from contextlib import contextmanager
import typing
from typing import (
    Any, Optional,

File api.py has 1483 lines of code (exceeds 400 allowed). Consider refactoring.

Open

from typing import (
    TYPE_CHECKING, Any, Optional, Union, overload
)
from collections.abc import Iterable, Generator, Coroutine
from typing_extensions import Literal

File mib.py has 1009 lines of code (exceeds 400 allowed). Consider refactoring.

Open

import re
import os
import platform
from glob import glob, escape
import logging

File pipelined.py has 1005 lines of code (exceeds 400 allowed). Consider refactoring.

Open

import itertools
import os
import sys
import logging
import functools

File k2is.py has 849 lines of code (exceeds 400 allowed). Consider refactoring.

Open

import os
import re
import glob
import math
import typing

File buffers.py has 825 lines of code (exceeds 400 allowed). Consider refactoring.

Open

from typing import Any, Optional, Union, TYPE_CHECKING, Generic, TypeVar
from collections.abc import Iterable
from typing_extensions import Literal
import mmap
import math

Function _execution_plan has a Cognitive Complexity of 64 (exceeds 5 allowed). Consider refactoring.

Open

def _execution_plan(
    udfs, ds: Union[DataSet, DataSetMeta], device_class: Optional[DeviceClass] = None,
    available_backends: Iterable[ArrayBackend] = BACKENDS
) -> tuple[ArrayBackend, ExecutionPlan]:
    '''

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File hdf5.py has 729 lines of code (exceeds 400 allowed). Consider refactoring.

Open

import os
import contextlib
import typing
from typing import Optional
import warnings

Function DatasetOpen has a Cognitive Complexity of 59 (exceeds 5 allowed). Consider refactoring.

Open

const DatasetOpen = () => {
    const dispatch = useDispatch();
    const openState = useSelector((state: RootReducer) => state.openDataset);

    const [didReset, setReset] = React.useState(false);

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File dask.py has 693 lines of code (exceeds 400 allowed). Consider refactoring.

Open

import os
import contextlib
from copy import deepcopy
import functools
import logging

File messages.ts has 609 lines of code (exceeds 400 allowed). Consider refactoring.

Open

import { JobList } from "./analysis/types"

/*
 * Common
 */

Function _correct_numba_inplace has a Cognitive Complexity of 45 (exceeds 5 allowed). Consider refactoring.

Open

def _correct_numba_inplace(buffer, dark_image, gain_map, exclude_pixels, repair_environments,
        repair_counts):
    '''
    Numerical work horse to perform detector corrections

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File frms6.py has 596 lines of code (exceeds 400 allowed). Consider refactoring.

Open

import os
import re
import csv
from glob import glob, escape
import typing

File com.py has 595 lines of code (exceeds 400 allowed). Consider refactoring.

Open

from enum import IntEnum
from typing import NamedTuple, Optional, Union
from typing_extensions import Literal

import numpy as np

File executor.py has 567 lines of code (exceeds 400 allowed). Consider refactoring.

Open

import queue
from typing import (
    Callable, Optional, Any, TYPE_CHECKING,
    TypeVar,
)

File seq.py has 565 lines of code (exceeds 400 allowed). Consider refactoring.

Open

# Based on the SEQ reader of the PIMS project, with the following license:
#
#    Copyright (c) 2013-2014 PIMS contributors
#    https://github.com/soft-matter/pims
#    All rights reserved

Function radial_bins has a Cognitive Complexity of 32 (exceeds 5 allowed). Consider refactoring.

Open

def radial_bins(centerX, centerY, imageSizeX, imageSizeY,
        radius=None, radius_inner=0, n_bins=None, normalize=False, use_sparse=None, dtype=None):
    '''
    Generate antialiased rings
    '''

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File raw_csr.py has 511 lines of code (exceeds 400 allowed). Consider refactoring.

Open

import typing
import os

import scipy.sparse
import numpy as np

Function _read_metadata has a Cognitive Complexity of 29 (exceeds 5 allowed). Consider refactoring.

Open

    def _read_metadata(cls, path, use_ds=None):
        with ncempy.io.dm.fileDM(path, on_memory=True) as fp:
            tags = fp.allTags
            array_map = {}
            start_from = 1 if fp.thumbnail else 0

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File state.py has 492 lines of code (exceeds 400 allowed). Consider refactoring.

Open

import os
import copy
import typing
import itertools
import logging