fixes/index_publication.fix
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## fix publication data at indexing
#####
if exists(department)
do list(path:department, var:loop)
do identity()
copy_field(loop._id,loop.tmp)
lookup_in_store(loop.tmp, search, bag:department)
move_field(loop.tmp.tree, loop.tree)
remove_field(loop.tmp)
end
end
end
if exists(project)
do list(path:project, var:loop)
do identity()
copy_field(loop._id,loop.tmp)
lookup_in_store(loop.tmp, search, bag:project)
move_field(loop.tmp.call_identifier,loop.call_identifier)
move_field(loop.tmp.grant_number,loop.grant_number)
remove_field(loop.tmp)
if all_match(loop.call_identifier,'FP7|H2020')
add_field(ec_funded,1)
end
end
end
end
## add flags for ISI/PMID
if all_match(external_id.isi.0, '^\w+$')
add_field(isi, 1)
end
if all_match(external_id.pmid.0, '^.+$')
add_field(pmid, 1)
end
## add OA flag for open access publications
if any_match(file.*.access_level, open_access)
add_field(oa, 1)
end
if any_match(main_file_link.*.open_access, 1)
add_field(oa, 1)
end
## add flag for OAI output (deleting strategy)
if all_match(status,"returned|deleted")
add_field(oai_deleted, 1)
else
remove_field(oai_deleted)
end