Showing 713 of 713 total issues
Line too long (96 > 79 characters) Open
Open
WATER_DROPLET_CYLINDRICAL_GRO = resource_filename('pytim', 'data/water_droplet_cylindrical.gro')- Read upRead up
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Limit all lines to a maximum of 79 characters.
There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side. The default wrapping on such
devices looks ugly. Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.
Reports error E501.Line too long (95 > 79 characters) Open
Open
>>> WATERSMALL_TRR = pytim.datafiles.pytim_data.fetch('WATERSMALL_TRR',tmpdir='./')- Read upRead up
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Limit all lines to a maximum of 79 characters.
There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side. The default wrapping on such
devices looks ugly. Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.
Reports error E501.Line too long (88 > 79 characters) Open
Open
>>> interface = pytim.ITIM(u,alpha=2.,group=oxygens,cluster_cut=3.5,molecular=False)- Read upRead up
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Limit all lines to a maximum of 79 characters.
There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side. The default wrapping on such
devices looks ugly. Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.
Reports error E501.Do not use bare 'except' Open
Open
except:- Read upRead up
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When catching exceptions, mention specific exceptions when possible.
Okay: except Exception:
Okay: except BaseException:
E722: except:Line too long (84 > 79 characters) Open
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"METHANOL_GRO", # methanol/vapour interface with molecules in the vapour phase- Read upRead up
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Limit all lines to a maximum of 79 characters.
There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side. The default wrapping on such
devices looks ugly. Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.
Reports error E501.Block comment should start with '# ' Open
Open
#labels = [label for label, val in self.type.iteritems() if val == name]- Read upRead up
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Separate inline comments by at least two spaces.
An inline comment is a comment on the same line as a statement.
Inline comments should be separated by at least two spaces from the
statement. They should start with a # and a single space.
Each line of a block comment starts with a # and a single space
(unless it is indented text inside the comment).
Okay: x = x + 1 # Increment x
Okay: x = x + 1 # Increment x
Okay: # Block comment
E261: x = x + 1 # Increment x
E262: x = x + 1 #Increment x
E262: x = x + 1 # Increment x
E265: #Block comment
E266: ### Block commentLine too long (90 > 79 characters) Open
Open
checking presence of a cached copy... not found. Fetching remote file... done.- Read upRead up
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Limit all lines to a maximum of 79 characters.
There are still many devices around that are limited to 80 character
lines; plus, limiting windows to 80 characters makes it possible to
have several windows side-by-side. The default wrapping on such
devices looks ugly. Therefore, please limit all lines to a maximum
of 79 characters. For flowing long blocks of text (docstrings or
comments), limiting the length to 72 characters is recommended.
Reports error E501.TODO found Open
Open
# TODO: add proper whole-molecule reconstruction- Create a ticketCreate a ticket
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TODO found Open
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# TODO: implement progressive averaging to handle very long trajs- Create a ticketCreate a ticket
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TODO found Open
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# TODO write a version that does not depend on passing an AtomGroup- Create a ticketCreate a ticket
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TODO found Open
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# distribution function. TODO update this when needed- Create a ticketCreate a ticket
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TODO found Open
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# TODO this is not a mask...should we change the name?- Create a ticketCreate a ticket
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TODO found Open
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x, y, z = self._select_coords(use, bins=bins) # TODO FIXME- Create a ticketCreate a ticket
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