| .bumpversion.cfg | |
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| .codeclimate.yml | |
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| .coveragerc | |
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| .dockerignore | |
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| .editorconfig | |
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| .gitignore | |
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| .pre-commit-config.yaml | |
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| .readthedocs.yml | |
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| .secrets.baseline | |
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| .travis.yml | |
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| .vscode/launch.json | |
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| .vscode/settings.json | |
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| CHANGELOG.md | |
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| CONDUCT.rst | |
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| CONTRIBUTING.rst | |
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| LICENSE | |
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| Makefile | |
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| README.md | |
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| VERSION | |
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| bel/api/README.md | |
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| bel/belspec/bel.ebnf.j2 | |
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| bel/db/es_mappings_terms.yml | |
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| docker/Dockerfile.dev | |
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| docker/Dockerfile.prod | |
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| poetry.lock | |
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| pyproject.toml | |
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| api/app/__init__.py | 0 |
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| api/app/core/jwt.py | 51 | D 2 days |
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| api/app/core/middleware.py | 27 |
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| api/app/gunicorn_conf.py | 35 |
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| api/app/main.py | 87 |
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| bel/__init__.py | 1 |
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| bel/__version__.py | 1 |
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| bel/api/core/exceptions.py | 12 |
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| bel/api/core/jwt.py | 51 | D 2 days |
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| bel/api/core/middleware.py | 27 |
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| bel/api/endpoints/bel.py | 34 |
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| bel/api/endpoints/belspec.py | 96 |
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| bel/api/endpoints/info.py | 47 |
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| bel/api/endpoints/nanopubs.py | 21 |
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| bel/api/endpoints/orthology.py | 13 |
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| bel/api/endpoints/pubmed.py | 21 |
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| bel/api/endpoints/resources.py | 40 |
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| bel/api/endpoints/terms.py | 72 | A 45 mins |
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| bel/belspec/crud.py | 181 | A 3 hrs |
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| bel/belspec/enhance.py | 258 | D 2 days |
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| bel/belspec/specifications.py | 61 |
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| bel/cli/scripts.py | 283 | C 1 day |
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| bel/core/logging_setup.py | 10 |
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| bel/core/mail.py | 24 |
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|