bio-miga/miga

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NameLines of codeMaintainabilityTest coverage
.codeclimate.yml
.gitignore
.gitmodules
.travis.yml
Gemfile
LICENSE
README.md
Rakefile
bin/miga
book.json
gui/Gemfile
lib/miga.rb5
A
0 mins
lib/miga/_data/aai-intax.tsv.gz
lib/miga/_data/aai-novel.tsv.gz
lib/miga/cli.rb143
A
2 hrs
lib/miga/cli/action.rb37
A
0 mins
lib/miga/cli/action/about.rb38
A
1 hr
lib/miga/cli/action/add.rb155
B
6 hrs
lib/miga/cli/action/add_result.rb20
A
0 mins
lib/miga/cli/action/classify_wf.rb87
A
3 hrs
lib/miga/cli/action/console.rb12
A
0 mins
lib/miga/cli/action/daemon.rb70
A
2 hrs
lib/miga/cli/action/date.rb11
A
0 mins
lib/miga/cli/action/derep_wf.rb84
A
1 hr
lib/miga/cli/action/doctor.rb221
C
1 day
lib/miga/cli/action/edit.rb18
A
0 mins
lib/miga/cli/action/files.rb25
A
45 mins
lib/miga/cli/action/find.rb42
A
0 mins
lib/miga/cli/action/generic.rb36
A
0 mins
lib/miga/cli/action/get.rb135
B
6 hrs
lib/miga/cli/action/get_db.rb185
A
2 hrs
lib/miga/cli/action/index_wf.rb23
A
0 mins
lib/miga/cli/action/init.rb234
B
5 hrs
lib/miga/cli/action/init/daemon_helper.rb115
A
2 hrs
lib/miga/cli/action/ln.rb36
A
0 mins
lib/miga/cli/action/ls.rb58
A
3 hrs
lib/miga/cli/action/ncbi_get.rb245
B
6 hrs
lib/miga/cli/action/new.rb39
A
0 mins
lib/miga/cli/action/next_step.rb21
A
25 mins
lib/miga/cli/action/plugins.rb22
A
0 mins
lib/miga/cli/action/preproc_wf.rb38
A
0 mins
lib/miga/cli/action/quality_wf.rb37
A
35 mins
lib/miga/cli/action/rm.rb19
A
0 mins
lib/miga/cli/action/run.rb46
A
45 mins
lib/miga/cli/action/stats.rb173
C
1 day
lib/miga/cli/action/summary.rb48
A
2 hrs
lib/miga/cli/action/tax_dist.rb109
B
5 hrs
lib/miga/cli/action/tax_index.rb42
A
0 mins
lib/miga/cli/action/tax_set.rb53
A
3 hrs
lib/miga/cli/action/tax_test.rb74
A
55 mins