Showing 1,637 of 1,651 total issues
Redundant begin
block detected. Open
begin
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This cop checks for redundant begin
blocks.
Currently it checks for code like this:
Example:
def redundant
begin
ala
bala
rescue StandardError => e
something
end
end
def preferred
ala
bala
rescue StandardError => e
something
end
Missing magic comment # frozen_string_literal: true
. Open
# @package MiGA
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This cop is designed to help upgrade to Ruby 3.0. It will add the
comment # frozen_string_literal: true
to the top of files to
enable frozen string literals. Frozen string literals may be default
in Ruby 3.0. The comment will be added below a shebang and encoding
comment. The frozen string literal comment is only valid in Ruby 2.3+.
Example: EnforcedStyle: when_needed (default)
# The `when_needed` style will add the frozen string literal comment
# to files only when the `TargetRubyVersion` is set to 2.3+.
# bad
module Foo
# ...
end
# good
# frozen_string_literal: true
module Foo
# ...
end
Example: EnforcedStyle: always
# The `always` style will always add the frozen string literal comment
# to a file, regardless of the Ruby version or if `freeze` or `<<` are
# called on a string literal.
# bad
module Bar
# ...
end
# good
# frozen_string_literal: true
module Bar
# ...
end
Example: EnforcedStyle: never
# The `never` will enforce that the frozen string literal comment does
# not exist in a file.
# bad
# frozen_string_literal: true
module Baz
# ...
end
# good
module Baz
# ...
end
Prefer annotated tokens (like %<foo>s</foo>
) over unannotated tokens (like %s
). Open
say 'MiGA:%s launched' % project.name
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Use a consistent style for named format string tokens.
Note:
unannotated
style cop only works for strings
which are passed as arguments to those methods:
sprintf
, format
, %
.
The reason is that unannotated format is very similar
to encoded URLs or Date/Time formatting strings.
Example: EnforcedStyle: annotated (default)
# bad
format('%{greeting}', greeting: 'Hello')
format('%s', 'Hello')
# good
format('%<greeting>s', greeting: 'Hello')</greeting>
Example: EnforcedStyle: template
# bad
format('%<greeting>s', greeting: 'Hello')
format('%s', 'Hello')
# good
format('%{greeting}', greeting: 'Hello')</greeting>
Example: EnforcedStyle: unannotated
# bad
format('%<greeting>s', greeting: 'Hello')
format('%{greeting}', 'Hello')
# good
format('%s', 'Hello')</greeting>
Use a guard clause instead of wrapping the code inside a conditional expression. Open
if klass.KNOWN_TYPES[self[:type]].nil?
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Use a guard clause instead of wrapping the code inside a conditional expression
Example:
# bad
def test
if something
work
end
end
# good
def test
return unless something
work
end
# also good
def test
work if something
end
# bad
if something
raise 'exception'
else
ok
end
# good
raise 'exception' if something
ok
Use !
instead of not
. Open
if unknown or not datasets.empty? or not name.nil?
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This cop checks for uses of the keyword not
instead of !
.
Example:
# bad - parentheses are required because of op precedence
x = (not something)
# good
x = !something
Avoid single-line method definitions. Open
def tax_str; "#{rank}:#{name.nil? ? '?' : name}"; end
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This cop checks for single-line method definitions that contain a body. It will accept single-line methods with no body.
Example:
# bad
def some_method; body end
def link_to(url); {:name => url}; end
def @table.columns; super; end
# good
def no_op; end
def self.resource_class=(klass); end
def @table.columns; end
Unnecessary spacing detected. Open
ln = doc.grep(%r{^\s+/db_xref="taxon:}).first
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This cop checks for extra/unnecessary whitespace.
Example:
# good if AllowForAlignment is true
name = "RuboCop"
# Some comment and an empty line
website += "/bbatsov/rubocop" unless cond
puts "rubocop" if debug
# bad for any configuration
set_app("RuboCop")
website = "https://github.com/bbatsov/rubocop"
Prefer annotated tokens (like %<foo>s</foo>
) over unannotated tokens (like %s
). Open
'%s/%s_genomic.fna.gz' % [url_dir, File.basename(url_dir)]
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Use a consistent style for named format string tokens.
Note:
unannotated
style cop only works for strings
which are passed as arguments to those methods:
sprintf
, format
, %
.
The reason is that unannotated format is very similar
to encoded URLs or Date/Time formatting strings.
Example: EnforcedStyle: annotated (default)
# bad
format('%{greeting}', greeting: 'Hello')
format('%s', 'Hello')
# good
format('%<greeting>s', greeting: 'Hello')</greeting>
Example: EnforcedStyle: template
# bad
format('%<greeting>s', greeting: 'Hello')
format('%s', 'Hello')
# good
format('%{greeting}', greeting: 'Hello')</greeting>
Example: EnforcedStyle: unannotated
# bad
format('%<greeting>s', greeting: 'Hello')
format('%{greeting}', 'Hello')
# good
format('%s', 'Hello')</greeting>
Prefer annotated tokens (like %<foo>s</foo>
) over unannotated tokens (like %s
). Open
say 'Queueing %s:%s' % [to_run[:ds_name], to_run[:job]]
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Use a consistent style for named format string tokens.
Note:
unannotated
style cop only works for strings
which are passed as arguments to those methods:
sprintf
, format
, %
.
The reason is that unannotated format is very similar
to encoded URLs or Date/Time formatting strings.
Example: EnforcedStyle: annotated (default)
# bad
format('%{greeting}', greeting: 'Hello')
format('%s', 'Hello')
# good
format('%<greeting>s', greeting: 'Hello')</greeting>
Example: EnforcedStyle: template
# bad
format('%<greeting>s', greeting: 'Hello')
format('%s', 'Hello')
# good
format('%{greeting}', greeting: 'Hello')</greeting>
Example: EnforcedStyle: unannotated
# bad
format('%<greeting>s', greeting: 'Hello')
format('%{greeting}', 'Hello')
# good
format('%s', 'Hello')</greeting>
Missing magic comment # frozen_string_literal: true
. Open
# @package MiGA
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This cop is designed to help upgrade to Ruby 3.0. It will add the
comment # frozen_string_literal: true
to the top of files to
enable frozen string literals. Frozen string literals may be default
in Ruby 3.0. The comment will be added below a shebang and encoding
comment. The frozen string literal comment is only valid in Ruby 2.3+.
Example: EnforcedStyle: when_needed (default)
# The `when_needed` style will add the frozen string literal comment
# to files only when the `TargetRubyVersion` is set to 2.3+.
# bad
module Foo
# ...
end
# good
# frozen_string_literal: true
module Foo
# ...
end
Example: EnforcedStyle: always
# The `always` style will always add the frozen string literal comment
# to a file, regardless of the Ruby version or if `freeze` or `<<` are
# called on a string literal.
# bad
module Bar
# ...
end
# good
# frozen_string_literal: true
module Bar
# ...
end
Example: EnforcedStyle: never
# The `never` will enforce that the frozen string literal comment does
# not exist in a file.
# bad
# frozen_string_literal: true
module Baz
# ...
end
# good
module Baz
# ...
end
Use =~
in places where the MatchData
returned by #match
will not be used. Open
if /^! (Completeness|Contamination): (.*)%/.match(ln)
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This cop identifies the use of Regexp#match
or String#match
, which
returns #<MatchData>
/nil
. The return value of =~
is an integral
index/nil
and is more performant.
Example:
# bad
do_something if str.match(/regex/)
while regex.match('str')
do_something
end
# good
method(str =~ /regex/)
return value unless regex =~ 'str'
Prefer annotated tokens (like %<foo>s</foo>
) over unannotated tokens (like %s
). Open
say '%s launched' % daemon_name
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Use a consistent style for named format string tokens.
Note:
unannotated
style cop only works for strings
which are passed as arguments to those methods:
sprintf
, format
, %
.
The reason is that unannotated format is very similar
to encoded URLs or Date/Time formatting strings.
Example: EnforcedStyle: annotated (default)
# bad
format('%{greeting}', greeting: 'Hello')
format('%s', 'Hello')
# good
format('%<greeting>s', greeting: 'Hello')</greeting>
Example: EnforcedStyle: template
# bad
format('%<greeting>s', greeting: 'Hello')
format('%s', 'Hello')
# good
format('%{greeting}', greeting: 'Hello')</greeting>
Example: EnforcedStyle: unannotated
# bad
format('%<greeting>s', greeting: 'Hello')
format('%{greeting}', 'Hello')
# good
format('%s', 'Hello')</greeting>
Do not prefix reader method names with get_
. Open
def get_ncbi_taxid_from_ncbi
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This cop makes sure that accessor methods are named properly.
Example:
# bad
def set_attribute(value)
end
# good
def attribute=(value)
end
# bad
def get_attribute
end
# good
def attribute
end
Indent the first parameter one step more than the start of the previous line. Open
to_run[:job], miga: vars['MIGA'], project: project
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This cop checks the indentation of the first parameter in a method call. Parameters after the first one are checked by Style/AlignParameters, not by this cop.
Example:
# bad
some_method(
first_param,
second_param)
# good
some_method(
first_param,
second_param)
Avoid rescuing without specifying an error class. Open
rescue => err
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This cop checks for rescuing StandardError
. There are two supported
styles implicit
and explicit
. This cop will not register an offense
if any error other than StandardError
is specified.
Example: EnforcedStyle: implicit
# `implicit` will enforce using `rescue` instead of
# `rescue StandardError`.
# bad
begin
foo
rescue StandardError
bar
end
# good
begin
foo
rescue
bar
end
# good
begin
foo
rescue OtherError
bar
end
# good
begin
foo
rescue StandardError, SecurityError
bar
end
Example: EnforcedStyle: explicit (default)
# `explicit` will enforce using `rescue StandardError`
# instead of `rescue`.
# bad
begin
foo
rescue
bar
end
# good
begin
foo
rescue StandardError
bar
end
# good
begin
foo
rescue OtherError
bar
end
# good
begin
foo
rescue StandardError, SecurityError
bar
end
Prefer single-quoted strings when you don't need string interpolation or special symbols. Open
raise "See `miga -h`" if action.nil?
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Checks if uses of quotes match the configured preference.
Example: EnforcedStyle: single_quotes (default)
# bad
"No special symbols"
"No string interpolation"
"Just text"
# good
'No special symbols'
'No string interpolation'
'Just text'
"Wait! What's #{this}!"
Example: EnforcedStyle: double_quotes
# bad
'Just some text'
'No special chars or interpolation'
# good
"Just some text"
"No special chars or interpolation"
"Every string in #{project} uses double_quotes"
Do not prefix reader method names with get_
. Open
def get_ncbi_taxonomy
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This cop makes sure that accessor methods are named properly.
Example:
# bad
def set_attribute(value)
end
# good
def attribute=(value)
end
# bad
def get_attribute
end
# good
def attribute
end
Provide an exception class and message as arguments to raise
. Open
raise MiGA::RemoteDataMissingError.new(
"NCBI Assembly Accession not found: #{acc}"
)
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This cop checks the args passed to fail
and raise
. For exploded
style (default), it recommends passing the exception class and message
to raise
, rather than construct an instance of the error. It will
still allow passing just a message, or the construction of an error
with more than one argument.
The exploded style works identically, but with the addition that it will also suggest constructing error objects when the exception is passed multiple arguments.
Example: EnforcedStyle: exploded (default)
# bad
raise StandardError.new("message")
# good
raise StandardError, "message"
fail "message"
raise MyCustomError.new(arg1, arg2, arg3)
raise MyKwArgError.new(key1: val1, key2: val2)
Example: EnforcedStyle: compact
# bad
raise StandardError, "message"
raise RuntimeError, arg1, arg2, arg3
# good
raise StandardError.new("message")
raise MyCustomError.new(arg1, arg2, arg3)
fail "message"
Prefer annotated tokens (like %<foo>s</foo>
) over unannotated tokens (like %s
). Open
say 'Queueing %s:%s' % [to_run[:ds_name], to_run[:job]]
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- Exclude checks
Use a consistent style for named format string tokens.
Note:
unannotated
style cop only works for strings
which are passed as arguments to those methods:
sprintf
, format
, %
.
The reason is that unannotated format is very similar
to encoded URLs or Date/Time formatting strings.
Example: EnforcedStyle: annotated (default)
# bad
format('%{greeting}', greeting: 'Hello')
format('%s', 'Hello')
# good
format('%<greeting>s', greeting: 'Hello')</greeting>
Example: EnforcedStyle: template
# bad
format('%<greeting>s', greeting: 'Hello')
format('%s', 'Hello')
# good
format('%{greeting}', greeting: 'Hello')</greeting>
Example: EnforcedStyle: unannotated
# bad
format('%<greeting>s', greeting: 'Hello')
format('%{greeting}', 'Hello')
# good
format('%s', 'Hello')</greeting>
Use next
to skip iteration. Open
if !runopts(k).nil? && runopts(k) =~ /%(\d+\$)?[ds]/
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Use next
to skip iteration instead of a condition at the end.
Example: EnforcedStyle: skipmodifierifs (default)
# bad
[1, 2].each do |a|
if a == 1
puts a
end
end
# good
[1, 2].each do |a|
next unless a == 1
puts a
end
# good
[1, 2].each do |o|
puts o unless o == 1
end
Example: EnforcedStyle: always
# With `always` all conditions at the end of an iteration needs to be
# replaced by next - with `skip_modifier_ifs` the modifier if like
# this one are ignored: `[1, 2].each { |a| return 'yes' if a == 1 }`
# bad
[1, 2].each do |o|
puts o unless o == 1
end
# bad
[1, 2].each do |a|
if a == 1
puts a
end
end
# good
[1, 2].each do |a|
next unless a == 1
puts a
end