bio-miga/miga

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Redundant self detected.
Open

    self.create if !update && !Project.exist?(self.path)
Severity: Minor
Found in lib/miga/project.rb by rubocop

This cop checks for redundant uses of self.

The usage of self is only needed when:

  • Sending a message to same object with zero arguments in presence of a method name clash with an argument or a local variable.

  • Calling an attribute writer to prevent an local variable assignment.

Note, with using explicit self you can only send messages with public or protected scope, you cannot send private messages this way.

Note we allow uses of self with operators because it would be awkward otherwise.

Example:

# bad
def foo(bar)
  self.baz
end

# good
def foo(bar)
  self.bar  # Resolves name clash with the argument.
end

def foo
  bar = 1
  self.bar  # Resolves name clash with the local variable.
end

def foo
  %w[x y z].select do |bar|
    self.bar == bar  # Resolves name clash with argument of the block.
  end
end

Redundant self detected.
Open

    self.load
Severity: Minor
Found in lib/miga/project.rb by rubocop

This cop checks for redundant uses of self.

The usage of self is only needed when:

  • Sending a message to same object with zero arguments in presence of a method name clash with an argument or a local variable.

  • Calling an attribute writer to prevent an local variable assignment.

Note, with using explicit self you can only send messages with public or protected scope, you cannot send private messages this way.

Note we allow uses of self with operators because it would be awkward otherwise.

Example:

# bad
def foo(bar)
  self.baz
end

# good
def foo(bar)
  self.bar  # Resolves name clash with the argument.
end

def foo
  bar = 1
  self.bar  # Resolves name clash with the local variable.
end

def foo
  %w[x y z].select do |bar|
    self.bar == bar  # Resolves name clash with argument of the block.
  end
end

Prefer annotated tokens (like %<foo>s</foo>) over unannotated tokens (like %s).
Open

    $stderr.print("[%s] %s %s %-12s   \r" % [Time.now, step, adv, left])
Severity: Minor
Found in lib/miga/common.rb by rubocop

Use a consistent style for named format string tokens.

Note: unannotated style cop only works for strings which are passed as arguments to those methods: sprintf, format, %. The reason is that unannotated format is very similar to encoded URLs or Date/Time formatting strings.

Example: EnforcedStyle: annotated (default)

# bad
format('%{greeting}', greeting: 'Hello')
format('%s', 'Hello')

# good
format('%<greeting>s', greeting: 'Hello')</greeting>

Example: EnforcedStyle: template

# bad
format('%<greeting>s', greeting: 'Hello')
format('%s', 'Hello')

# good
format('%{greeting}', greeting: 'Hello')</greeting>

Example: EnforcedStyle: unannotated

# bad
format('%<greeting>s', greeting: 'Hello')
format('%{greeting}', 'Hello')

# good
format('%s', 'Hello')</greeting>

Ternary operators must not be nested. Prefer if or else constructs instead.
Open

          left_time > 1440 ? ('%.1fd left' % (left_time / 1440)) :
          left_time > 60   ? ('%.1fh left' % (left_time / 60))   :
          ('%.1fm left' % left_time)
Severity: Minor
Found in lib/miga/common.rb by rubocop

Use next to skip iteration.
Open

      if n > v
Severity: Minor
Found in lib/miga/common.rb by rubocop

Use next to skip iteration instead of a condition at the end.

Example: EnforcedStyle: skipmodifierifs (default)

# bad
[1, 2].each do |a|
  if a == 1
    puts a
  end
end

# good
[1, 2].each do |a|
  next unless a == 1
  puts a
end

# good
[1, 2].each do |o|
  puts o unless o == 1
end

Example: EnforcedStyle: always

# With `always` all conditions at the end of an iteration needs to be
# replaced by next - with `skip_modifier_ifs` the modifier if like
# this one are ignored: `[1, 2].each { |a| return 'yes' if a == 1 }`

# bad
[1, 2].each do |o|
  puts o unless o == 1
end

# bad
[1, 2].each do |a|
  if a == 1
    puts a
  end
end

# good
[1, 2].each do |a|
  next unless a == 1
  puts a
end

Replace class var @@DISTANCE_TASKS with a class instance var.
Open

  @@DISTANCE_TASKS = %i[
Severity: Minor
Found in lib/miga/project/base.rb by rubocop

This cop checks for uses of class variables. Offenses are signaled only on assignment to class variables to reduce the number of offenses that would be reported.

Missing top-level module documentation comment.
Open

module MiGA::Project::Base
Severity: Minor
Found in lib/miga/project/base.rb by rubocop

This cop checks for missing top-level documentation of classes and modules. Classes with no body are exempt from the check and so are namespace modules - modules that have nothing in their bodies except classes, other modules, or constant definitions.

The documentation requirement is annulled if the class or module has a "#:nodoc:" comment next to it. Likewise, "#:nodoc: all" does the same for all its children.

Example:

# bad
class Person
  # ...
end

# good
# Description/Explanation of Person class
class Person
  # ...
end

Use snake_case for method names.
Open

  def self.LONG_VERSION
Severity: Minor
Found in lib/miga/version.rb by rubocop

This cop makes sure that all methods use the configured style, snake_case or camelCase, for their names.

Example: EnforcedStyle: snake_case (default)

# bad
def fooBar; end

# good
def foo_bar; end

Example: EnforcedStyle: camelCase

# bad
def foo_bar; end

# good
def fooBar; end

Use v.zero? instead of v == 0.
Open

        if !force && v == 0 && !%i[verbosity skip_maintenance].include?(k)
Severity: Minor
Found in lib/miga/daemon/base.rb by rubocop

This cop checks for usage of comparison operators (==, >, <) to test numbers as zero, positive, or negative. These can be replaced by their respective predicate methods. The cop can also be configured to do the reverse.

The cop disregards #nonzero? as it its value is truthy or falsey, but not true and false, and thus not always interchangeable with != 0.

The cop ignores comparisons to global variables, since they are often populated with objects which can be compared with integers, but are not themselves Interger polymorphic.

Example: EnforcedStyle: predicate (default)

# bad

foo == 0
0 > foo
bar.baz > 0

# good

foo.zero?
foo.negative?
bar.baz.positive?

Example: EnforcedStyle: comparison

# bad

foo.zero?
foo.negative?
bar.baz.positive?

# good

foo == 0
0 > foo
bar.baz > 0

Use snake_case for variable names.
Open

      @@RESULT_DIRS ||=
Severity: Minor
Found in lib/miga/result/base.rb by rubocop

This cop makes sure that all variables use the configured style, snake_case or camelCase, for their names.

Example: EnforcedStyle: snake_case (default)

# bad
fooBar = 1

# good
foo_bar = 1

Example: EnforcedStyle: camelCase

# bad
foo_bar = 1

# good
fooBar = 1

Use && instead of and.
Open

      if opts[:additions] and opts[:symbolize]
Severity: Minor
Found in lib/miga/json.rb by rubocop

This cop checks for uses of and and or, and suggests using && and || instead. It can be configured to check only in conditions, or in all contexts.

Example: EnforcedStyle: always (default)

# bad
foo.save and return

# bad
if foo and bar
end

# good
foo.save && return

# good
if foo && bar
end

Example: EnforcedStyle: conditionals

# bad
if foo and bar
end

# good
foo.save && return

# good
foo.save and return

# good
if foo && bar
end

Use snake_case for method names.
Open

    def RESULT_DIRS
Severity: Minor
Found in lib/miga/project/base.rb by rubocop

This cop makes sure that all methods use the configured style, snake_case or camelCase, for their names.

Example: EnforcedStyle: snake_case (default)

# bad
def fooBar; end

# good
def foo_bar; end

Example: EnforcedStyle: camelCase

# bad
def foo_bar; end

# good
def fooBar; end

Use snake_case for method names.
Open

    def OPTIONS
Severity: Minor
Found in lib/miga/project/base.rb by rubocop

This cop makes sure that all methods use the configured style, snake_case or camelCase, for their names.

Example: EnforcedStyle: snake_case (default)

# bad
def fooBar; end

# good
def foo_bar; end

Example: EnforcedStyle: camelCase

# bad
def foo_bar; end

# good
def fooBar; end

Align .map with .times on line 11.
Open

        .map { |i| Process.fork { yield(i) } }
Severity: Minor
Found in lib/miga/parallel.rb by rubocop

This cop checks the indentation of the method name part in method calls that span more than one line.

Example: EnforcedStyle: aligned

# bad
while myvariable
.b
  # do something
end

# good
while myvariable
      .b
  # do something
end

# good
Thing.a
     .b
     .c

Example: EnforcedStyle: indented

# good
while myvariable
  .b

  # do something
end

Example: EnforcedStyle: indentedrelativeto_receiver

# good
while myvariable
        .a
        .b

  # do something
end

# good
myvariable = Thing
               .a
               .b
               .c

Avoid the use of Perl-style backrefs.
Open

            stats[$1.downcase.to_sym][0] = $2.to_f
Severity: Minor
Found in lib/miga/result/stats.rb by rubocop

This cop looks for uses of Perl-style regexp match backreferences like $1, $2, etc.

Example:

# bad
puts $1

# good
puts Regexp.last_match(1)

Missing top-level class documentation comment.
Open

class MiGA::Result < MiGA::MiGA
Severity: Minor
Found in lib/miga/result/base.rb by rubocop

This cop checks for missing top-level documentation of classes and modules. Classes with no body are exempt from the check and so are namespace modules - modules that have nothing in their bodies except classes, other modules, or constant definitions.

The documentation requirement is annulled if the class or module has a "#:nodoc:" comment next to it. Likewise, "#:nodoc: all" does the same for all its children.

Example:

# bad
class Person
  # ...
end

# good
# Description/Explanation of Person class
class Person
  # ...
end

Missing magic comment # frozen_string_literal: true.
Open

require 'miga/result/base'
Severity: Minor
Found in lib/miga/result/dates.rb by rubocop

This cop is designed to help upgrade to Ruby 3.0. It will add the comment # frozen_string_literal: true to the top of files to enable frozen string literals. Frozen string literals may be default in Ruby 3.0. The comment will be added below a shebang and encoding comment. The frozen string literal comment is only valid in Ruby 2.3+.

Example: EnforcedStyle: when_needed (default)

# The `when_needed` style will add the frozen string literal comment
# to files only when the `TargetRubyVersion` is set to 2.3+.
# bad
module Foo
  # ...
end

# good
# frozen_string_literal: true

module Foo
  # ...
end

Example: EnforcedStyle: always

# The `always` style will always add the frozen string literal comment
# to a file, regardless of the Ruby version or if `freeze` or `<<` are
# called on a string literal.
# bad
module Bar
  # ...
end

# good
# frozen_string_literal: true

module Bar
  # ...
end

Example: EnforcedStyle: never

# The `never` will enforce that the frozen string literal comment does
# not exist in a file.
# bad
# frozen_string_literal: true

module Baz
  # ...
end

# good
module Baz
  # ...
end

Convert if nested inside else to elsif.
Open

      return if n < total
Severity: Minor
Found in lib/miga/common.rb by rubocop

If the else branch of a conditional consists solely of an if node, it can be combined with the else to become an elsif. This helps to keep the nesting level from getting too deep.

Example:

# bad
if condition_a
  action_a
else
  if condition_b
    action_b
  else
    action_c
  end
end

# good
if condition_a
  action_a
elsif condition_b
  action_b
else
  action_c
end

Use next to skip iteration.
Open

        if File.exist? File.join(result.dir, "#{ds.name}.#{suffix}")
Severity: Minor
Found in lib/miga/project/dataset.rb by rubocop

Use next to skip iteration instead of a condition at the end.

Example: EnforcedStyle: skipmodifierifs (default)

# bad
[1, 2].each do |a|
  if a == 1
    puts a
  end
end

# good
[1, 2].each do |a|
  next unless a == 1
  puts a
end

# good
[1, 2].each do |o|
  puts o unless o == 1
end

Example: EnforcedStyle: always

# With `always` all conditions at the end of an iteration needs to be
# replaced by next - with `skip_modifier_ifs` the modifier if like
# this one are ignored: `[1, 2].each { |a| return 'yes' if a == 1 }`

# bad
[1, 2].each do |o|
  puts o unless o == 1
end

# bad
[1, 2].each do |a|
  if a == 1
    puts a
  end
end

# good
[1, 2].each do |a|
  next unless a == 1
  puts a
end

Missing top-level module documentation comment.
Open

module MiGA::Daemon::Base
Severity: Minor
Found in lib/miga/daemon/base.rb by rubocop

This cop checks for missing top-level documentation of classes and modules. Classes with no body are exempt from the check and so are namespace modules - modules that have nothing in their bodies except classes, other modules, or constant definitions.

The documentation requirement is annulled if the class or module has a "#:nodoc:" comment next to it. Likewise, "#:nodoc: all" does the same for all its children.

Example:

# bad
class Person
  # ...
end

# good
# Description/Explanation of Person class
class Person
  # ...
end
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