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lib/miga/cli/action/ncbi_get.rb

Summary

Maintainability
A
0 mins
Test Coverage

Method has too many lines. [25/10]
Open

  def parse_cli
    cli.defaults = {
      query: false, unlink: false, reference: false,
      complete: false, chromosome: false,
      scaffold: false, contig: false, add_version: true, dry: false,
Severity: Minor
Found in lib/miga/cli/action/ncbi_get.rb by rubocop

This cop checks if the length of a method exceeds some maximum value. Comment lines can optionally be ignored. The maximum allowed length is configurable.

Assignment Branch Condition size for parse_cli is too high. [15.52/15]
Wontfix

  def parse_cli
    cli.defaults = {
      query: false, unlink: false, reference: false,
      complete: false, chromosome: false,
      scaffold: false, contig: false, add_version: true, dry: false,
Severity: Minor
Found in lib/miga/cli/action/ncbi_get.rb by rubocop

This cop checks that the ABC size of methods is not higher than the configured maximum. The ABC size is based on assignments, branches (method calls), and conditions. See http://c2.com/cgi/wiki?AbcMetric

Prefer single-quoted strings when you don't need string interpolation or special symbols.
Open

        warn "The use of --api-key is deprecated, please use --ncbi-api-key"
Severity: Minor
Found in lib/miga/cli/action/ncbi_get.rb by rubocop

Checks if uses of quotes match the configured preference.

Example: EnforcedStyle: single_quotes (default)

# bad
"No special symbols"
"No string interpolation"
"Just text"

# good
'No special symbols'
'No string interpolation'
'Just text'
"Wait! What's #{this}!"

Example: EnforcedStyle: double_quotes

# bad
'Just some text'
'No special chars or interpolation'

# good
"Just some text"
"No special chars or interpolation"
"Every string in #{project} uses double_quotes"

Missing top-level class documentation comment.
Open

class MiGA::Cli::Action::NcbiGet < MiGA::Cli::Action
Severity: Minor
Found in lib/miga/cli/action/ncbi_get.rb by rubocop

This cop checks for missing top-level documentation of classes and modules. Classes with no body are exempt from the check and so are namespace modules - modules that have nothing in their bodies except classes, other modules, or constant definitions.

The documentation requirement is annulled if the class or module has a "#:nodoc:" comment next to it. Likewise, "#:nodoc: all" does the same for all its children.

Example:

# bad
class Person
  # ...
end

# good
# Description/Explanation of Person class
class Person
  # ...
end

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