bio-miga/miga

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lib/miga/project.rb

Summary

Maintainability
A
0 mins
Test Coverage
A
93%

Assignment Branch Condition size for create is too high. [22.65/15]
Open

  def create
    unless MiGA::MiGA.initialized?
      warn 'Projects cannot be processed yet, first run: miga init'
    end

Severity: Minor
Found in lib/miga/project.rb by rubocop

This cop checks that the ABC size of methods is not higher than the configured maximum. The ABC size is based on assignments, branches (method calls), and conditions. See http://c2.com/cgi/wiki?AbcMetric

Method has too many lines. [14/10]
Open

  def create
    unless MiGA::MiGA.initialized?
      warn 'Projects cannot be processed yet, first run: miga init'
    end

Severity: Minor
Found in lib/miga/project.rb by rubocop

This cop checks if the length of a method exceeds some maximum value. Comment lines can optionally be ignored. The maximum allowed length is configurable.

Assignment Branch Condition size for initialize is too high. [18.17/15]
Open

  def initialize(path, update = false)
    @datasets = {}
    @do_not_save = false
    @path = File.absolute_path(path)
    self.create if !update && !Project.exist?(self.path)
Severity: Minor
Found in lib/miga/project.rb by rubocop

This cop checks that the ABC size of methods is not higher than the configured maximum. The ABC size is based on assignments, branches (method calls), and conditions. See http://c2.com/cgi/wiki?AbcMetric

Use %r around regular expression.
Open

      y = File.expand_path(y, path) if y && y =~ /^[^\/]/
Severity: Minor
Found in lib/miga/project.rb by rubocop

This cop enforces using // or %r around regular expressions.

Example: EnforcedStyle: slashes (default)

# bad
snake_case = %r{^[\dA-Z_]+$}

# bad
regex = %r{
  foo
  (bar)
  (baz)
}x

# good
snake_case = /^[\dA-Z_]+$/

# good
regex = /
  foo
  (bar)
  (baz)
/x

Example: EnforcedStyle: percent_r

# bad
snake_case = /^[\dA-Z_]+$/

# bad
regex = /
  foo
  (bar)
  (baz)
/x

# good
snake_case = %r{^[\dA-Z_]+$}

# good
regex = %r{
  foo
  (bar)
  (baz)
}x

Example: EnforcedStyle: mixed

# bad
snake_case = %r{^[\dA-Z_]+$}

# bad
regex = /
  foo
  (bar)
  (baz)
/x

# good
snake_case = /^[\dA-Z_]+$/

# good
regex = %r{
  foo
  (bar)
  (baz)
}x

Example: AllowInnerSlashes: false (default)

# If `false`, the cop will always recommend using `%r` if one or more
# slashes are found in the regexp string.

# bad
x =~ /home\//

# good
x =~ %r{home/}

Example: AllowInnerSlashes: true

# good
x =~ /home\//

Redundant self detected.
Open

    self.create if !update && !Project.exist?(self.path)
Severity: Minor
Found in lib/miga/project.rb by rubocop

This cop checks for redundant uses of self.

The usage of self is only needed when:

  • Sending a message to same object with zero arguments in presence of a method name clash with an argument or a local variable.

  • Calling an attribute writer to prevent an local variable assignment.

Note, with using explicit self you can only send messages with public or protected scope, you cannot send private messages this way.

Note we allow uses of self with operators because it would be awkward otherwise.

Example:

# bad
def foo(bar)
  self.baz
end

# good
def foo(bar)
  self.bar  # Resolves name clash with the argument.
end

def foo
  bar = 1
  self.bar  # Resolves name clash with the local variable.
end

def foo
  %w[x y z].select do |bar|
    self.bar == bar  # Resolves name clash with argument of the block.
  end
end

Missing magic comment # frozen_string_literal: true.
Open

# @package MiGA
Severity: Minor
Found in lib/miga/project.rb by rubocop

This cop is designed to help upgrade to Ruby 3.0. It will add the comment # frozen_string_literal: true to the top of files to enable frozen string literals. Frozen string literals may be default in Ruby 3.0. The comment will be added below a shebang and encoding comment. The frozen string literal comment is only valid in Ruby 2.3+.

Example: EnforcedStyle: when_needed (default)

# The `when_needed` style will add the frozen string literal comment
# to files only when the `TargetRubyVersion` is set to 2.3+.
# bad
module Foo
  # ...
end

# good
# frozen_string_literal: true

module Foo
  # ...
end

Example: EnforcedStyle: always

# The `always` style will always add the frozen string literal comment
# to a file, regardless of the Ruby version or if `freeze` or `<<` are
# called on a string literal.
# bad
module Bar
  # ...
end

# good
# frozen_string_literal: true

module Bar
  # ...
end

Example: EnforcedStyle: never

# The `never` will enforce that the frozen string literal comment does
# not exist in a file.
# bad
# frozen_string_literal: true

module Baz
  # ...
end

# good
module Baz
  # ...
end

Redundant self detected.
Open

    self.load if self.metadata.nil?
Severity: Minor
Found in lib/miga/project.rb by rubocop

This cop checks for redundant uses of self.

The usage of self is only needed when:

  • Sending a message to same object with zero arguments in presence of a method name clash with an argument or a local variable.

  • Calling an attribute writer to prevent an local variable assignment.

Note, with using explicit self you can only send messages with public or protected scope, you cannot send private messages this way.

Note we allow uses of self with operators because it would be awkward otherwise.

Example:

# bad
def foo(bar)
  self.baz
end

# good
def foo(bar)
  self.bar  # Resolves name clash with the argument.
end

def foo
  bar = 1
  self.bar  # Resolves name clash with the local variable.
end

def foo
  %w[x y z].select do |bar|
    self.bar == bar  # Resolves name clash with argument of the block.
  end
end

Redundant self detected.
Open

    self.load
Severity: Minor
Found in lib/miga/project.rb by rubocop

This cop checks for redundant uses of self.

The usage of self is only needed when:

  • Sending a message to same object with zero arguments in presence of a method name clash with an argument or a local variable.

  • Calling an attribute writer to prevent an local variable assignment.

Note, with using explicit self you can only send messages with public or protected scope, you cannot send private messages this way.

Note we allow uses of self with operators because it would be awkward otherwise.

Example:

# bad
def foo(bar)
  self.baz
end

# good
def foo(bar)
  self.bar  # Resolves name clash with the argument.
end

def foo
  bar = 1
  self.bar  # Resolves name clash with the local variable.
end

def foo
  %w[x y z].select do |bar|
    self.bar == bar  # Resolves name clash with argument of the block.
  end
end

Redundant self detected.
Open

    self.metadata[:type] = :mixed if type.nil?
Severity: Minor
Found in lib/miga/project.rb by rubocop

This cop checks for redundant uses of self.

The usage of self is only needed when:

  • Sending a message to same object with zero arguments in presence of a method name clash with an argument or a local variable.

  • Calling an attribute writer to prevent an local variable assignment.

Note, with using explicit self you can only send messages with public or protected scope, you cannot send private messages this way.

Note we allow uses of self with operators because it would be awkward otherwise.

Example:

# bad
def foo(bar)
  self.baz
end

# good
def foo(bar)
  self.bar  # Resolves name clash with the argument.
end

def foo
  bar = 1
  self.bar  # Resolves name clash with the local variable.
end

def foo
  %w[x y z].select do |bar|
    self.bar == bar  # Resolves name clash with argument of the block.
  end
end

Redundant self detected.
Open

    self.load
Severity: Minor
Found in lib/miga/project.rb by rubocop

This cop checks for redundant uses of self.

The usage of self is only needed when:

  • Sending a message to same object with zero arguments in presence of a method name clash with an argument or a local variable.

  • Calling an attribute writer to prevent an local variable assignment.

Note, with using explicit self you can only send messages with public or protected scope, you cannot send private messages this way.

Note we allow uses of self with operators because it would be awkward otherwise.

Example:

# bad
def foo(bar)
  self.baz
end

# good
def foo(bar)
  self.bar  # Resolves name clash with the argument.
end

def foo
  bar = 1
  self.bar  # Resolves name clash with the local variable.
end

def foo
  %w[x y z].select do |bar|
    self.bar == bar  # Resolves name clash with argument of the block.
  end
end

Redundant self detected.
Open

    self.load if self.metadata.nil?
Severity: Minor
Found in lib/miga/project.rb by rubocop

This cop checks for redundant uses of self.

The usage of self is only needed when:

  • Sending a message to same object with zero arguments in presence of a method name clash with an argument or a local variable.

  • Calling an attribute writer to prevent an local variable assignment.

Note, with using explicit self you can only send messages with public or protected scope, you cannot send private messages this way.

Note we allow uses of self with operators because it would be awkward otherwise.

Example:

# bad
def foo(bar)
  self.baz
end

# good
def foo(bar)
  self.bar  # Resolves name clash with the argument.
end

def foo
  bar = 1
  self.bar  # Resolves name clash with the local variable.
end

def foo
  %w[x y z].select do |bar|
    self.bar == bar  # Resolves name clash with argument of the block.
  end
end

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