bio-miga/miga

View on GitHub
manual/part3/Web.md

Summary

Maintainability
Test Coverage
# MiGA Web

MiGA Web allows you to explore and query your projects directly from the
browser. We provide a publicly available server including several
general-purpose projects as well as some clade-specific ones:
[MiGA Online](http://microbial-genomes.org/). For an introduction on MiGA
Online, take a look at these video tutorials:


## Introduction

[Video Tutorial 1: Introduction](https://www.youtube.com/watch?v=6p5rFQoW75Y)

![Tutorial 1](../img/web1.jpg)


## Choosing the Right Analysis

[Video Tutorial 2: Choosing the Right Analysis](https://www.youtube.com/watch?v=zqwP3A-IrfM)

![Tutorial 2](../img/web2.jpg)


## Understanding Taxonomy

[Video Tutorial 3: Understanding Taxonomy](https://www.youtube.com/watch?v=LoiriVJNGHk)

![Tutorial 3](../img/web3.jpg)


## Evaluating Quality

[Video Tutorial 4: Evaluating Quality](https://www.youtube.com/watch?v=WmGIPrImCCE)

![Tutorial 4](../img/web4.jpg)


## Deploying MiGA Web

If you want to host your own MiGA server, or just launch one from your own
computer to simplify browsing results, take a look at the instructions
to [deploy MiGA Web](http://code.microbial-genomes.org/miga-web).


## Test data

If you want to test the MiGA Online Web server, download a
[test assembly](http://microbial-genomes.org/query_datasets/1626/result/assembly/largecontigs)
and upload it to the [NCBI_Prok project](http://microbial-genomes.org/query_datasets/new?project_id=8).
If you want to see in advance what to expect, check out the results:
[dataset analysis complete](http://microbial-genomes.org/query_datasets/M:D98_O3E).