bio-miga/miga

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manual/part6/summaries.md

Summary

Maintainability
Test Coverage
# Standard summaries

All workflows generate summary tables, which are raw text tab-delimited
files with information about the input datasets. The standard summaries
include stats for:

* `assembly.tsv`: [Assembly](../part5/workflow.md#assembly)
* `cds.tsv`: [CDS](../part5/workflow.md#cds)
* `essential_genes.tsv`: [Essential Genes](../part5/workflow.md#essential_genes)
* `ssu.tsv`: [SSU](../part5/workflow.md#ssu)
* `taxonomy.tsv`: [Taxonomy](../part5/workflow.md#taxonomy)