biosustain/optlang

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src/optlang/scipy_interface.py

Summary

Maintainability
D
1 day
Test Coverage

File scipy_interface.py has 492 lines of code (exceeds 250 allowed). Consider refactoring.
Open

# Copyright 2015 Novo Nordisk Foundation Center for Biosustainability,
# Technical University of Denmark.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
Severity: Minor
Found in src/optlang/scipy_interface.py - About 7 hrs to fix

    Problem has 29 functions (exceeds 20 allowed). Consider refactoring.
    Open

    class Problem(object):
        """
        Scipy linprog problem. This object implements an object-oriented interface to the linprog solver function.
        This class is wrapped by the Model object, but can also be used as a stand-alone low-level interface.
        """
    Severity: Minor
    Found in src/optlang/scipy_interface.py - About 3 hrs to fix

      Function _add_constraints has a Cognitive Complexity of 11 (exceeds 5 allowed). Consider refactoring.
      Open

          def _add_constraints(self, constraints, sloppy=False):
              if sloppy is False:
                  for c in constraints:
                      if not c.is_Linear:
                          raise ValueError("Scipy solver only works with linear constraints. Please use another interface.")
      Severity: Minor
      Found in src/optlang/scipy_interface.py - About 1 hr to fix

      Cognitive Complexity

      Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

      A method's cognitive complexity is based on a few simple rules:

      • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
      • Code is considered more complex for each "break in the linear flow of the code"
      • Code is considered more complex when "flow breaking structures are nested"

      Further reading

      Function __init__ has 6 arguments (exceeds 4 allowed). Consider refactoring.
      Open

          def __init__(self, name, lb=None, ub=None, type="continuous", *args, **kwargs):
      Severity: Minor
      Found in src/optlang/scipy_interface.py - About 45 mins to fix

        Function primal has a Cognitive Complexity of 7 (exceeds 5 allowed). Consider refactoring.
        Open

            def primal(self):
                if getattr(self, "problem", None) is not None and self.problem.status == interface.OPTIMAL:
                    if self.lb is not None:
                        primal = self.lb + self.problem.problem.get_constraint_slack(self.lower_constraint_name)
                        return primal
        Severity: Minor
        Found in src/optlang/scipy_interface.py - About 35 mins to fix

        Cognitive Complexity

        Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

        A method's cognitive complexity is based on a few simple rules:

        • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
        • Code is considered more complex for each "break in the linear flow of the code"
        • Code is considered more complex when "flow breaking structures are nested"

        Further reading

        Function coefficient_dict has a Cognitive Complexity of 6 (exceeds 5 allowed). Consider refactoring.
        Open

            def coefficient_dict(self):
                if self.expression.is_Add:
                    coefficient_dict = {variable: coef for variable, coef in
                                        self.expression.as_coefficients_dict().items() if variable.is_Symbol}
                elif self.expression.is_Atom and self.expression.is_Symbol:
        Severity: Minor
        Found in src/optlang/scipy_interface.py - About 25 mins to fix

        Cognitive Complexity

        Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

        A method's cognitive complexity is based on a few simple rules:

        • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
        • Code is considered more complex for each "break in the linear flow of the code"
        • Code is considered more complex when "flow breaking structures are nested"

        Further reading

        Function coefficient_dict has a Cognitive Complexity of 6 (exceeds 5 allowed). Consider refactoring.
        Open

            def coefficient_dict(self, names=True):
                if self.expression.is_Add:
                    coefficient_dict = {variable: coef for variable, coef in
                                        self.expression.as_coefficients_dict().items() if variable.is_Symbol}
                    coefficient_dict = {var: float(coef) for var, coef in coefficient_dict.items()}
        Severity: Minor
        Found in src/optlang/scipy_interface.py - About 25 mins to fix

        Cognitive Complexity

        Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

        A method's cognitive complexity is based on a few simple rules:

        • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
        • Code is considered more complex for each "break in the linear flow of the code"
        • Code is considered more complex when "flow breaking structures are nested"

        Further reading

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