greenelab/deep-review

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content/03.categorize.md

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Bare URL used
Open

For instance, in the eMERGE consortia and PheKB database [@url:https://phekb.org/implementations], most samples with expert validation contain only 100 to 300 patients.
Severity: Info
Found in content/03.categorize.md by markdownlint

MD034 - Bare URL used

Tags: links, url

Aliases: no-bare-urls

This rule is triggered whenever a URL is given that isn't surrounded by angle brackets:

For more information, see http://www.example.com/.

To fix this, add angle brackets around the URL:

For more information, see <http:></http:>.

Rationale: Without angle brackets, the URL isn't converted into a link in many markdown parsers.

Note: if you do want a bare URL without it being converted into a link, enclose it in a code block, otherwise in some markdown parsers it will be converted:

`http://www.example.com`

Bare URL used
Open

Federated learning [@url:http://proceedings.mlr.press/v54/mcmahan17a.html] and secure aggregations [@url:https://eprint.iacr.org/2017/281.pdf; @tag:Papernot2017_pate] are complementary approaches that reinforce differential privacy.
Severity: Info
Found in content/03.categorize.md by markdownlint

MD034 - Bare URL used

Tags: links, url

Aliases: no-bare-urls

This rule is triggered whenever a URL is given that isn't surrounded by angle brackets:

For more information, see http://www.example.com/.

To fix this, add angle brackets around the URL:

For more information, see <http:></http:>.

Rationale: Without angle brackets, the URL isn't converted into a link in many markdown parsers.

Note: if you do want a bare URL without it being converted into a link, enclose it in a code block, otherwise in some markdown parsers it will be converted:

`http://www.example.com`

Bare URL used
Open

[@url:http://hazyresearch.github.io/snorkel/blog/weak_supervision.html].
Severity: Info
Found in content/03.categorize.md by markdownlint

MD034 - Bare URL used

Tags: links, url

Aliases: no-bare-urls

This rule is triggered whenever a URL is given that isn't surrounded by angle brackets:

For more information, see http://www.example.com/.

To fix this, add angle brackets around the URL:

For more information, see <http:></http:>.

Rationale: Without angle brackets, the URL isn't converted into a link in many markdown parsers.

Note: if you do want a bare URL without it being converted into a link, enclose it in a code block, otherwise in some markdown parsers it will be converted:

`http://www.example.com`

Bare URL used
Open

The resulting dataset [@url:https://nihcc.app.box.com/v/ChestXray-NIHCC] consisted of 112,120 frontal-view chest X-ray images from 30,805 patients, and each image was associated with one or more *text-mined* (weakly-labeled) pathology categories (e.g. pneumonia and cardiomegaly) or "no finding" otherwise.
Severity: Info
Found in content/03.categorize.md by markdownlint

MD034 - Bare URL used

Tags: links, url

Aliases: no-bare-urls

This rule is triggered whenever a URL is given that isn't surrounded by angle brackets:

For more information, see http://www.example.com/.

To fix this, add angle brackets around the URL:

For more information, see <http:></http:>.

Rationale: Without angle brackets, the URL isn't converted into a link in many markdown parsers.

Note: if you do want a bare URL without it being converted into a link, enclose it in a code block, otherwise in some markdown parsers it will be converted:

`http://www.example.com`

First header should be a top level header
Open

## Deep learning and patient categorization
Severity: Info
Found in content/03.categorize.md by markdownlint

MD002 - First header should be a top level header

Tags: headers

Aliases: first-header-h1

Parameters: level (number; default 1)

This rule is triggered when the first header in the document isn't a h1 header:

## This isn't a H1 header

### Another header

The first header in the document should be a h1 header:

# Start with a H1 header

## Then use a H2 for subsections

Bare URL used
Open

Numerous commentators have described data as the new oil [@url:http://ana.blogs.com/maestros/2006/11/data_is_the_new.html; @url:https://medium.com/twenty-one-hundred/data-is-the-new-oil-a-ludicrous-proposition-1d91bba4f294].
Severity: Info
Found in content/03.categorize.md by markdownlint

MD034 - Bare URL used

Tags: links, url

Aliases: no-bare-urls

This rule is triggered whenever a URL is given that isn't surrounded by angle brackets:

For more information, see http://www.example.com/.

To fix this, add angle brackets around the URL:

For more information, see <http:></http:>.

Rationale: Without angle brackets, the URL isn't converted into a link in many markdown parsers.

Note: if you do want a bare URL without it being converted into a link, enclose it in a code block, otherwise in some markdown parsers it will be converted:

`http://www.example.com`

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