setup.py
from setuptools import Extension, setup
from Cython.Build import cythonize
import numpy
extensions = [
Extension('gamtools.cosegregation_internal',
["lib/gamtools/cosegregation_internal.pyx"],
include_dirs=[numpy.get_include()]),
Extension('gamtools.mirnylib_numutils_internal',
["lib/gamtools/mirnylib_numutils_internal.pyx"],
include_dirs=[numpy.get_include()]),
]
setup(
ext_modules = cythonize(extensions, language_level = "3"),
)