publiclab/spectral-workbench

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Showing 127 of 127 total issues

Identical blocks of code found in 2 locations. Consider refactoring.
Open

  def validate_json
    if data.nil?
      true
    else
      begin
Severity: Minor
Found in app/models/snapshot.rb and 1 other location - About 1 hr to fix
app/models/spectrum.rb on lines 67..78

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 47.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Identical blocks of code found in 2 locations. Consider refactoring.
Open

  def validate_json
    if data.nil?
      true
    else
      begin
Severity: Minor
Found in app/models/spectrum.rb and 1 other location - About 1 hr to fix
app/models/snapshot.rb on lines 37..48

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 47.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Method choose has a Cognitive Complexity of 9 (exceeds 5 allowed). Consider refactoring.
Open

  def choose
    params[:id] = params[:id].to_s

    comparison = if params[:id] == 'calibration' # special case; include linearCalibration too
                   "LIKE 'linearCalibration' OR tags.name LIKE"
Severity: Minor
Found in app/controllers/spectrums_controller.rb - About 55 mins to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method get_bins has a Cognitive Complexity of 9 (exceeds 5 allowed). Consider refactoring.
Open

  def get_bins(wavelength)
    base = (wavelength / 10) * 10
    diff = wavelength - base

    if base < 10 || base > 1490
Severity: Minor
Found in app/models/spectrum.rb - About 55 mins to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method index has a Cognitive Complexity of 9 (exceeds 5 allowed). Consider refactoring.
Open

  def index
    id = params[:id]

    if id.nil? # No need to search anything
      flash[:error] = 'ID is required for matching'
Severity: Minor
Found in app/controllers/match_controller.rb - About 55 mins to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method update has a Cognitive Complexity of 9 (exceeds 5 allowed). Consider refactoring.
Open

  def update
    @macro = Macro.find params[:id]
    if logged_in?
      if @macro.user_id == current_user.id
        @macro.title = params[:title]
Severity: Minor
Found in app/controllers/macros_controller.rb - About 55 mins to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method generate_hashed_values has a Cognitive Complexity of 9 (exceeds 5 allowed). Consider refactoring.
Open

  def generate_hashed_values
    lines = latest_json_data['lines']

    values = {}
    counts = {}
Severity: Minor
Found in app/models/spectrum.rb - About 55 mins to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Method latest has a Cognitive Complexity of 9 (exceeds 5 allowed). Consider refactoring.
Open

  def latest
    spectrum = Spectrum.find(params[:id])
    if spectrum.snapshots.count.positive?
      @snapshot = spectrum.latest_snapshot
      is_snapshot = true
Severity: Minor
Found in app/controllers/spectrums_controller.rb - About 55 mins to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

Further reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

    window.location = "/spectra/calibrate/"+$W.spectrum_id+"?x1="+x1+"&w1="+w1+"&x2="+x2+"&w2="+w2
Severity: Minor
Found in app/assets/javascripts/api.js and 1 other location - About 50 mins to fix
app/assets/javascripts/analyze.js on lines 141..141

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 51.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Similar blocks of code found in 2 locations. Consider refactoring.
Open

    f.action = "/spectra/calibrate/"+$W.spectrum_id+"?x1="+x1+"&w1="+w1+"&x2="+x2+"&w2="+w2
Severity: Minor
Found in app/assets/javascripts/analyze.js and 1 other location - About 50 mins to fix
app/assets/javascripts/api.js on lines 29..29

Duplicated Code

Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

Tuning

This issue has a mass of 51.

We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

Refactorings

Further Reading

Avoid deeply nested control flow statements.
Open

          if (green == 255) $W.data[4].data.push([w,100])
Severity: Major
Found in app/assets/javascripts/capture.js - About 45 mins to fix

    Method notify_commenters has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.
    Open

      def notify_commenters(new_comment, current_user)
        emails = []
        comments.each do |comment|
          emails << comment.email if comment != new_comment && (!current_user || (comment.author != current_user.login)) && comment.author != author
        end
    Severity: Minor
    Found in app/models/spectra_set.rb - About 45 mins to fix

    Cognitive Complexity

    Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

    A method's cognitive complexity is based on a few simple rules:

    • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
    • Code is considered more complex for each "break in the linear flow of the code"
    • Code is considered more complex when "flow breaking structures are nested"

    Further reading

    Avoid deeply nested control flow statements.
    Open

              if ($W.baseline != null) {
                var wavelength = parseInt($W.getWavelength(col))
                $W.data[0].data.push([wavelength,$W.baseline[wavelength]-intensity/2.55])
              } else $W.data[0].data.push([parseInt($W.getWavelength(col)),intensity/2.55])
    Severity: Major
    Found in app/assets/javascripts/capture.js - About 45 mins to fix

      Method notify_commenters has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.
      Open

        def notify_commenters(new_comment, current_user)
          emails = []
          comments.each do |comment|
            emails << comment.email if comment != new_comment && (!current_user || (comment.author != current_user.login)) && comment.author != author
          end
      Severity: Minor
      Found in app/models/spectrum.rb - About 45 mins to fix

      Cognitive Complexity

      Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

      A method's cognitive complexity is based on a few simple rules:

      • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
      • Code is considered more complex for each "break in the linear flow of the code"
      • Code is considered more complex when "flow breaking structures are nested"

      Further reading

      Avoid deeply nested control flow statements.
      Open

                if (blue == 255) $W.data[4].data.push([w,100])
      Severity: Major
      Found in app/assets/javascripts/capture.js - About 45 mins to fix

        Function alert_overexposure has a Cognitive Complexity of 8 (exceeds 5 allowed). Consider refactoring.
        Open

          alert_overexposure: function() {
            console.log('Checking for overexposure');
            var oe = $W.detect_overexposure()
            if (oe.r || oe.g || oe.b) {
              var msg = "<b>Light source too strong</b>; clipping in channels: "
        Severity: Minor
        Found in app/assets/javascripts/capture.js - About 45 mins to fix

        Cognitive Complexity

        Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

        A method's cognitive complexity is based on a few simple rules:

        • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
        • Code is considered more complex for each "break in the linear flow of the code"
        • Code is considered more complex when "flow breaking structures are nested"

        Further reading

        Function setup has 6 arguments (exceeds 4 allowed). Consider refactoring.
        Open

            setup: function(min_width,min_height,min_slope,threshold,pixels,wavelengths) {
        Severity: Minor
        Found in app/assets/javascripts/api.js - About 45 mins to fix

          Function setup has 6 arguments (exceeds 4 allowed). Consider refactoring.
          Open

              setup: function(min_width,min_height,min_slope,threshold,pixels,wavelengths) {
          Severity: Minor
          Found in app/assets/javascripts/api.js - About 45 mins to fix

            Similar blocks of code found in 2 locations. Consider refactoring.
            Open

                  respond_to do |format|
                    format.html do
                      flash[:notice] = 'Comment saved.'
                      redirect_to spectrum_path(@spectrum) + '#c' + @comment.id.to_s
                    end
            Severity: Minor
            Found in app/controllers/comments_controller.rb and 1 other location - About 45 mins to fix
            app/controllers/comments_controller.rb on lines 56..65

            Duplicated Code

            Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

            Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

            When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

            Tuning

            This issue has a mass of 40.

            We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

            The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

            If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

            See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

            Refactorings

            Further Reading

            Similar blocks of code found in 2 locations. Consider refactoring.
            Open

                  respond_to do |format|
                    format.html do
                      flash[:notice] = 'Comment saved.'
                      redirect_to sets_path(@set) + '#c' + @comment.id.to_s
                    end
            Severity: Minor
            Found in app/controllers/comments_controller.rb and 1 other location - About 45 mins to fix
            app/controllers/comments_controller.rb on lines 25..34

            Duplicated Code

            Duplicated code can lead to software that is hard to understand and difficult to change. The Don't Repeat Yourself (DRY) principle states:

            Every piece of knowledge must have a single, unambiguous, authoritative representation within a system.

            When you violate DRY, bugs and maintenance problems are sure to follow. Duplicated code has a tendency to both continue to replicate and also to diverge (leaving bugs as two similar implementations differ in subtle ways).

            Tuning

            This issue has a mass of 40.

            We set useful threshold defaults for the languages we support but you may want to adjust these settings based on your project guidelines.

            The threshold configuration represents the minimum mass a code block must have to be analyzed for duplication. The lower the threshold, the more fine-grained the comparison.

            If the engine is too easily reporting duplication, try raising the threshold. If you suspect that the engine isn't catching enough duplication, try lowering the threshold. The best setting tends to differ from language to language.

            See codeclimate-duplication's documentation for more information about tuning the mass threshold in your .codeclimate.yml.

            Refactorings

            Further Reading

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