app/models/tasks/plate_transfer_handler.rb
# frozen_string_literal: true
module Tasks::PlateTransferHandler
class InvalidBatch < StandardError
end
def render_plate_transfer_task(task, _params)
ActiveRecord::Base.transaction { @target = find_or_create_target(task) }
end
def includes_for_plate_creation
[{ asset: [:map, { plate: %i[plate_purpose barcodes] }, :aliquots] }, { target_asset: [] }]
end
# rubocop:todo Metrics/MethodLength
def find_or_create_target(task) # rubocop:todo Metrics/AbcSize
return target_plate if target_plate.present?
# We only eager load the request stuff if we actually need it.
batch_requests = @batch.requests.includes(includes_for_plate_creation)
source_wells = batch_requests.map(&:asset)
raise InvalidBatch if unsuitable_wells?(source_wells)
task.purpose.create!.tap do |target|
well_map = target.wells.index_by { |well| well.map_id }
batch_requests.each do |outer_request|
source = outer_request.asset
TransferRequest.create!(
asset: source,
target_asset: well_map[source.map_id],
submission_id: outer_request.submission_id
)
TransferRequest.create!(
asset: well_map[source.map_id],
target_asset: outer_request.target_asset,
submission_id: outer_request.submission_id
)
end
end
end
# rubocop:enable Metrics/MethodLength
def target_plate
transfer =
TransferRequest
.for_request(@batch.requests.first)
.where(submission_id: @batch.requests.first.submission_id)
.includes(target_asset: :plate)
.first
return nil if transfer.blank?
transfer.target_asset.plate
end
def unsuitable_wells?(source_wells)
# assumes all the source wells are on the same plate
(source_wells - source_wells.first.plate.wells.with_contents).present?
end
private :unsuitable_wells?
def do_plate_transfer_task(_task, _params)
return if target_plate.state == 'passed'
StateChange.create(target: target_plate, target_state: 'passed', user: current_user)
end
end