wurmlab/GeneValidator

View on GitHub
.github/workflows/GeneValidator.yml

Summary

Maintainability
Test Coverage
# This workflow uses actions that are not certified by GitHub.
# They are provided by a third-party and are governed by
# separate terms of service, privacy policy, and support
# documentation.
# This workflow will download a prebuilt Ruby version, install dependencies and run tests with Rake
# For more information see: https://github.com/marketplace/actions/setup-ruby-jruby-and-truffleruby

name: GV Build Status

on:
  push:
    branches: [ master ]
  pull_request:
    branches: [ master ]

jobs:
  test:

    runs-on: ubuntu-latest
    strategy:
      matrix:
        ruby-version: ['2.4.10', '2.5', '2.6', '2.7']

    steps:
    - uses: actions/checkout@v2
    - name: Set up Ruby
    # To automatically get bug fixes and new Ruby versions for ruby/setup-ruby,
    # change this to (see https://github.com/ruby/setup-ruby#versioning):
    # uses: ruby/setup-ruby@v1
      uses: ruby/setup-ruby@473e4d8fe5dd94ee328fdfca9f8c9c7afc9dae5e
      with:
        ruby-version: ${{ matrix.ruby-version }}
        bundler-cache: true # runs 'bundle install' and caches installed gems automatically

    - name: Install Mafft
      run: |
        sudo apt-get update
        sudo apt-get install mafft

    - name: Setup Code Climate test-reporter
      run: |
        curl -L https://codeclimate.com/downloads/test-reporter/test-reporter-latest-linux-amd64 > ./cc-test-reporter
        chmod +x ./cc-test-reporter
        ./cc-test-reporter before-build

    - name: Run tests
      run: bundle exec rake test

    - name: Publish code coverage
      run: |
        export GIT_BRANCH="${GITHUB_REF/refs\/heads\//}"
        ./cc-test-reporter after-build -r 2177997ae2dd26804c32e1ec34a2221f94b71a2170f6c1db2c020f8858cd87f2