KarrLab/datanator

View on GitHub
.gitignore

Summary

Maintainability
Test Coverage
# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class
.pytest_cache/

# C extensions
*.so

# Distribution / packaging
.Python
env/
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib64/
parts/
sdist/
var/
*.egg-info/
.installed.cfg
*.egg
src/
*.DS_Store

# PyInstaller
#  Usually these files are written by a python script from a template
#  before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec

# Installer logs
pip-log.txt
pip-delete-this-directory.txt

# test output
tests/reports/
tests/output/


# Unit test / coverage reports
htmlcov/
.tox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*,cover
.hypothesis/

# Translations
*.mo
*.pot

# Django stuff:
*.log
local_settings.py

# Flask stuff:
instance/
.webassets-cache

# MongoDB stuff:
./db_volumes

# Scrapy stuff:
.scrapy

# Sphinx generated documentation
docs/_build/
docs/source/
docs/.doctrees/

# PyBuilder
target/

# IPython Notebook
.ipynb_checkpoints

# pyenv
.python-version

# celery beat schedule file
celerybeat-schedule

# dotenv
.env

# virtualenv
venv/
ENV/
.venv

# Spyder project settings
.spyderproject

# Rope project settings
.ropeproject

# temporary Excel files
.~lock.*

# scratch
scratch/
datanator/data/

# passwords
tests/fixtures/secret/

# IDE configuration
.idea/

# cache files
datanator/data_source/cache/
intact/
datanator/data/cache/CommonSchema.sql
datanator/builds/logs/
*.sqlite

# configuration
datanator.cfg
datanator/production_server.py

#data source files for YMDB
datanator/data_source/YMDB/

# minerva
minerva/*

# ontology file
*.obo

# invisible stuff
.*
# test output
tests/data_source/test_processing/