datanator/data_source/array_express_tools/taxon_exceptions.txt
Recorded Taxon -- Correct Taxon
Homo sapiens + Aspergillus fumigatus -- Homo sapiens, Aspergillus fumigatus
Homo sapiens + Candida albicans -- Homo sapiens, Candida albicans
Homo sapiens + Candida parapsilosis -- Homo sapiens
Homo sapiens + Saccharomyces cerevisiae -- Homo sapiens
human -- Homo sapiens
mouse -- mus musculus
Homo Sapien -- Homo sapiens
Trypanosma congolense -- Trypanosoma congolense
mixed sample: human cell line AGS and Salmonella Typhimurium SL1344 -- Homo sapiens, Salmonella Typhimurium SL1344
mixed sample: human cell line CaCo-2 and Salmonella Typhimurium SL1344 -- Homo sapiens, Salmonella Typhimurium SL1344
mixed sample: human cell line HEK 293 and Salmonella Typhimurium SL1344 -- Homo sapiens, Salmonella Typhimurium SL1344
mixed sample: human cell line HT29 and Salmonella Typhimurium SL1344 -- Homo sapiens, Salmonella Typhimurium SL1344
mixed sample: human cell line LoVo and Salmonella Typhimurium SL1344 -- Homo sapiens, Salmonella Typhimurium SL1344
mixed sample: human cell line THP-1 (-PMA)and Salmonella Typhimurium SL1344 -- Homo sapiens, Salmonella Typhimurium SL1344
mixed sample: mouse cell line BMDM and Salmonella Typhimurium SL1344 -- mus musculus, Salmonella Typhimurium SL1344
mixed sample: mouse cell line L929 and Salmonella Typhimurium SL1344 -- mus musculus, Salmonella Typhimurium SL1344
mixed sample: mouse cell line MEF and Salmonella Typhimurium SL1344 -- mus musculus, Salmonella Typhimurium SL1344
mixed sample: mouse cell line RAW264.7 and Salmonella Typhimurium SL1344 -- mus musculus, Salmonella Typhimurium SL1344
mixed sample: pig cell line 3D4/31 and Salmonella Typhimurium SL1344 -- sus scrofa, Salmonella Typhimurium SL1344
mixed sample: pig cell line IPEC-J2 and Salmonella Typhimurium SL1344 -- sus scrofa, Salmonella Typhimurium SL1344
human cell line HeLa-S3 -- Homo sapiens
mixed sample (human cell line HeLa-S3 + Salmonella typhimurium SL1344) -- Homo sapiens, Salmonella Typhimurium SL1344
mixed sample: human cell line HeLa-S3 and Salmonella Typhimurium SL1344 -- Homo sapiens, Salmonella Typhimurium SL1344
Xanthomonas oryzae pv. oryzae KACC10331 -- Xanthomonas oryzae
Leishmania mexicana and Mus musculus -- Leishmania mexicana, Mus musculus
Acinetobacter baumanii -- Acinetobacter baumannii
Zebrafish -- Danio rerio
Human -- Homo sapiens
Japanese rice fish -- Oryzias latipes
Japanses rice fish -- Oryzias latipes
House mouse -- mus musculus
-- None
Mouse -- mus musculus
Homo sapien -- Homo sapiens
Acinetobacter baumannii 1592897 -- Acinetobacter baumannii
Acinetobacter baumannii 1564232 -- Acinetobacter baumannii
Acinetobacter baumannii 983759 -- Acinetobacter baumannii
Acinetobacter baumannii 478810 -- Acinetobacter baumannii
Strongyloides_stercoralis -- Strongyloides stercoralis
Solanum lycopersicum L. -- Solanum lycopersicum
chimpanzee -- Pan troglodytes
Holcus lanatus L -- Holcus lanatus
Eupolybothrus sp. PS-2013 -- Eupolybothrus
Oryctolagus cuniculus domesticus -- Oryctolagus cuniculus
Reaumuria soongorica -- Reaumuria
Lactobacillus oligofermentans LMG 22743T + Lactococcus piscium MKFS47 -- Lactobacillus oligofermentans DSM 15707 = LMG 22743, Lactococcus piscium MKFS47
Lactococcus lactis subsp. cremoris CNCM I-1631 -- Lactococcus lactis subsp. cremoris
Mycobacterium smegmatis str. MC2 155 -- Mycolicibacterium smegmatis MC2 155
Lactobacillus oligofermentans LMG 22743T -- Lactobacillus oligofermentans DSM 15707 = LMG 22743
Frankia sp. CcI3 -- Frankia