File database.py has 1099 lines of code (exceeds 250 allowed). Consider refactoring.

Open

#!/usr/bin/env python

import argparse
import bson
import copy

Function is_session_compliant has a Cognitive Complexity of 96 (exceeds 5 allowed). Consider refactoring.

Open

def is_session_compliant(session, template):
    """
    Given a project-level session template and a session,
    returns True/False if the session is in compliance with the template
    """

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File dataexplorerhandler.py has 710 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import copy
import json

from elasticsearch import ElasticsearchException, TransportError, RequestError, helpers

File reporthandler.py has 704 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import bson
import copy
import unicodecsv as csv
import datetime
import dateutil

Function upgrade_to_21 has a Cognitive Complexity of 67 (exceeds 5 allowed). Consider refactoring.

Open

def upgrade_to_21():
    """
    scitran/core issue #189 - Data Model v2

    Field `metadata` renamed to `info`

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Function get has a Cognitive Complexity of 65 (exceeds 5 allowed). Consider refactoring.

Open

    def get(self, cont_name, list_name, **kwargs):
        _id = kwargs.pop('cid')
        permchecker, storage, _, _, keycheck = self._initialize_request(cont_name, list_name, _id)
        list_name = storage.list_name
        filename = kwargs.get('name')

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File listhandler.py has 561 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import os
import bson
import copy
import datetime
import dateutil

Function download has a Cognitive Complexity of 60 (exceeds 5 allowed). Consider refactoring.

Open

    def download(self, **kwargs):
        """
        .. http:get:: /api/(cont_name)*/(cid)*/analyses/(analysis_id)/{filegroup:inputs|files}/(filename)*

            * - not required

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Function exports has a Cognitive Complexity of 59 (exceeds 5 allowed). Consider refactoring.

Open

module.exports = function(grunt) {
    var path = require('path');
    var fs = require('fs');
    var _ = require('lodash');
    var yaml = require('js-yaml');

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File handlers.py has 533 lines of code (exceeds 250 allowed). Consider refactoring.

Open

"""
API request handlers for the jobs module
"""
import bson
import copy

File placer.py has 532 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import bson
import copy
import datetime
import dateutil
import os

Function _preflight_archivestream has a Cognitive Complexity of 56 (exceeds 5 allowed). Consider refactoring.

Open

    def _preflight_archivestream(self, req_spec, collection=None):
        data_path = config.get_item('persistent', 'data_path')
        arc_prefix = self.get_param('prefix', 'scitran')
        file_cnt = 0
        total_size = 0

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Function exports has 213 lines of code (exceeds 25 allowed). Consider refactoring.

Open

module.exports = function(grunt) {
    var path = require('path');
    var fs = require('fs');
    var _ = require('lodash');
    var yaml = require('js-yaml');

File containerhandler.py has 509 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import bson
import datetime
import dateutil

from .. import config

Function _parse_request has a Cognitive Complexity of 49 (exceeds 5 allowed). Consider refactoring.

Open

    def _parse_request(self, request_type='search'):

        try:
            request = self.request.json_body
        except (ValueError):

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File hierarchy.py has 475 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import bson
import copy
import datetime
import dateutil.parser
import difflib

Function resolve has a Cognitive Complexity of 38 (exceeds 5 allowed). Consider refactoring.

Open

    def resolve(self):
        """Resolve a path through the hierarchy."""

        if self.public_request:
            self.abort(403, 'Request requires login')

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File containerstorage.py has 406 lines of code (exceeds 250 allowed). Consider refactoring.

Open

import datetime

import bson
import copy

Function initialization_auth has a Cognitive Complexity of 34 (exceeds 5 allowed). Consider refactoring.

Open

    def initialization_auth(self):
        drone_request = False
        job_context = None
        session_token = self.request.headers.get('Authorization', None)
        drone_secret = self.request.headers.get('X-SciTran-Auth', None)

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File dicom_doctype.py has 378 lines of code (exceeds 250 allowed). Consider refactoring.

Open

#!/usr/bin/env python

import ast
import copy
import dateutil.parser