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tripal/tripal_galaxy

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Showing 493 of 567 total issues

A comma should follow the last multiline array item. Found: ''
Open

              '<pre>' . $history_content['creating_job']['stderr'] . '</pre>'
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Array indentation error, expected 6 spaces but found 8
Open

        '#type' => 'item',
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Array indentation error, expected 6 spaces but found 8
Open

        '#title' => t('Result Files'),
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Array indentation error, expected 8 spaces but found 10
Open

          'data' => 'Workflow Name',
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Array indentation error, expected 4 spaces but found 6
Open

      array_key_exists('error', $submission->errors) ? $submission->errors['error'] : '',
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Array indentation error, expected 8 spaces but found 10
Open

          'data' => 'End Time',
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Array indentation error, expected 4 spaces but found 6
Open

      '#collapsible' => TRUE,
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Line indented incorrectly; expected 6 spaces, found 7
Open

       } */
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Line indented incorrectly; expected 4 spaces, found 2
Open

  ->execute()
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Array indentation error, expected 6 spaces but found 8
Open

        'status' => 'deleted',
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Array indentation error, expected 8 spaces but found 10
Open

          'header' => TRUE,
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Array indentation error, expected 8 spaces but found 10
Open

          'data' => 'History Name',
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Inline comments must end in full-stops, exclamation marks, colons, question marks, or closing parentheses
Open

    // Dig down through dataset_collections to find the real dataset
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Line indented incorrectly; expected 4 spaces, found 2
Open

  ->condition('galaxy_id', $submission->galaxy_id)
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Array indentation error, expected 6 spaces but found 8
Open

        '#type' => 'item',
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Array indentation error, expected 8 spaces but found 10
Open

          'data' => 'Submission Error',
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Array indentation error, expected 8 spaces but found 10
Open

          'header' => TRUE,
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Line indented incorrectly; expected 6 spaces, found 7
Open

       // SPF: originally this was $history_content['dataset_id'] but for
Severity: Minor
Found in includes/tripal_galaxy.results.inc by phpcodesniffer

Inline comments must end in full-stops, exclamation marks, colons, question marks, or closing parentheses
Open

  // Get the workflow
Severity: Minor
Found in includes/tripal_galaxy.admin.inc by phpcodesniffer

Inline comments must end in full-stops, exclamation marks, colons, question marks, or closing parentheses
Open

  // Get the defaults
Severity: Minor
Found in includes/tripal_galaxy.admin.inc by phpcodesniffer
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