| scripts/gimme_benchmark | |
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| scripts/combine_peaks | |
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| scripts/gimme | |
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| scripts/coverage_table | |
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| scripts/download_motif_databases.py | 5 | A 0 mins | F 0% |
| gimmemotifs/commands/background.py | 11 | A 0 mins | D 66% |
| gimmemotifs/commands/motif2factors.py | 15 | A 0 mins | F 40% |
| gimmemotifs/commands/prediction.py | 20 | A 0 mins | F 25% |
| gimmemotifs/commands/logo.py | 25 | A 0 mins | C 71% |
| gimmemotifs/commands/threshold.py | 25 | A 0 mins | F 29% |
| gimmemotifs/commands/pfmscan.py | 26 | A 0 mins | A 100% |
| gimmemotifs/commands/match.py | 41 | A 1 hr | F 50% |
| gimmemotifs/tools/jaspar.py | 44 | A 0 mins | F 50% |
| gimmemotifs/commands/location.py | 44 | A 0 mins | F 26% |
| gimmemotifs/commands/maelstrom.py | 44 | A 0 mins | F 18% |
| gimmemotifs/tools/dinamo.py | 50 | A 0 mins | A 100% |
| gimmemotifs/tools/dreme.py | 51 | A 0 mins | F 37% |
| gimmemotifs/tools/prosampler.py | 60 | A 0 mins | A 96% |
| gimmemotifs/tools/yamda.py | 66 | A 0 mins | F 40% |
| gimmemotifs/motif/validation.py | 68 | A 25 mins | F 35% |
| gimmemotifs/tools/xxmotif.py | 70 | A 0 mins | F 37% |
| gimmemotifs/commands/diff.py | 72 | A 1 hr | F 21% |
| gimmemotifs/tools/homer.py | 73 | A 0 mins | A 96% |
| gimmemotifs/tools/trawler.py | 86 | A 0 mins | F 28% |
| gimmemotifs/tools/amd.py | 88 | A 0 mins | A 100% |
| gimmemotifs/commands/cluster.py | 88 | A 0 mins | A 90% |
| gimmemotifs/tools/hms.py | 90 | A 0 mins | A 100% |
| gimmemotifs/tools/rpmcmc.py | 90 | A 1 hr | F 22% |
| gimmemotifs/tools/weeder.py | 93 | A 0 mins | A 97% |
| gimmemotifs/tools/improbizer.py | 93 | A 0 mins | A 100% |
| gimmemotifs/scanner/utils.py | 95 | A 25 mins | C 73% |
| gimmemotifs/tools/chipmunk.py | 95 | A 0 mins | A 96% |
| gimmemotifs/tools/posmo.py | 96 | A 0 mins | F 20% |
| gimmemotifs/tools/gadem.py | 97 | A 2 hrs | F 20% |
| gimmemotifs/tools/bioprospector.py | 102 | A 0 mins | A 98% |
| gimmemotifs/tools/motifprogram.py | 104 | A 0 mins | C 79% |
| gimmemotifs/maelstrom/rank.py | 109 | A 0 mins | A 96% |
| gimmemotifs/tools/meme.py | 111 | B 4 hrs | A 96% |
| gimmemotifs/tools/memew.py | 112 | B 4 hrs | A 96% |
| gimmemotifs/tools/mdmodule.py | 115 | A 1 hr | A 93% |
| gimmemotifs/fasta.py | 116 | A 55 mins | D 60% |
| gimmemotifs/tools/motifsampler.py | 150 | A 0 mins | C 76% |
| gimmemotifs/motif/_scanning.py | 160 | A 0 mins | F 54% |
| gimmemotifs/motif/_comparison.py | 164 | A 2 hrs | F 25% |
| gimmemotifs/motif/_plotting.py | 215 | B 5 hrs | A 92% |
| gimmemotifs/commands/motifs.py | 246 | C 7 hrs | B 82% |
| gimmemotifs/preprocessing.py | 251 | A 45 mins | B 83% |
| gimmemotifs/plot.py | 269 | A 3 hrs | F 25% |
| gimmemotifs/motif/prediction.py | 273 | A 25 mins | C 79% |
| gimmemotifs/motif/cluster.py | 281 | C 7 hrs | A 90% |