| gimmemotifs/included_tools/__init__.py | |
| F 0% |
| scripts/download_motif_databases.py | 5 | A 0 mins | F 0% |
| gimmemotifs/orthologs.py | 523 | C 7 hrs | F 13% |
| gimmemotifs/commands/maelstrom.py | 44 | A 0 mins | F 18% |
| gimmemotifs/tools/gadem.py | 97 | A 2 hrs | F 20% |
| gimmemotifs/tools/posmo.py | 96 | A 0 mins | F 20% |
| gimmemotifs/commands/diff.py | 72 | A 1 hr | F 21% |
| gimmemotifs/tools/rpmcmc.py | 90 | A 1 hr | F 22% |
| gimmemotifs/db/__init__.py | |
| F 24% |
| gimmemotifs/commands/prediction.py | 20 | A 0 mins | F 25% |
| gimmemotifs/motif/_comparison.py | 164 | A 2 hrs | F 25% |
| gimmemotifs/plot.py | 269 | A 3 hrs | F 25% |
| gimmemotifs/commands/location.py | 44 | A 0 mins | F 26% |
| gimmemotifs/tools/trawler.py | 86 | A 0 mins | F 28% |
| gimmemotifs/commands/threshold.py | 25 | A 0 mins | F 29% |
| gimmemotifs/motif/validation.py | 68 | A 25 mins | F 35% |
| gimmemotifs/tools/dreme.py | 51 | A 0 mins | F 37% |
| gimmemotifs/tools/xxmotif.py | 70 | A 0 mins | F 37% |
| gimmemotifs/commands/motif2factors.py | 15 | A 0 mins | F 40% |
| gimmemotifs/maelstrom/__init__.py | |
| F 40% |
| gimmemotifs/tools/yamda.py | 66 | A 0 mins | F 40% |
| gimmemotifs/_version.py | |
| F 44% |
| gimmemotifs/commands/match.py | 41 | A 1 hr | F 50% |
| gimmemotifs/tools/jaspar.py | 44 | A 0 mins | F 50% |
| gimmemotifs/motif/_scanning.py | 160 | A 0 mins | F 54% |
| gimmemotifs/fasta.py | 116 | A 55 mins | D 60% |
| gimmemotifs/utils.py | 519 | C 7 hrs | D 61% |
| gimmemotifs/maelstrom/moap.py | 589 | A 3 hrs | D 62% |
| gimmemotifs/motif/__init__.py | |
| D 64% |
| gimmemotifs/scanner/__init__.py | |
| D 65% |
| gimmemotifs/commands/background.py | 11 | A 0 mins | D 66% |
| gimmemotifs/report.py | 868 | A 3 hrs | D 69% |
| gimmemotifs/motif/denovo.py | 568 | A 0 mins | C 70% |
| gimmemotifs/background.py | 490 | A 1 hr | C 70% |
| gimmemotifs/comparison.py | 775 | D 1 day | C 71% |
| gimmemotifs/commands/logo.py | 25 | A 0 mins | C 71% |
| gimmemotifs/scanner/utils.py | 95 | A 25 mins | C 73% |
| gimmemotifs/motif/base.py | 775 | C 7 hrs | C 75% |
| gimmemotifs/tools/__init__.py | |
| C 75% |
| gimmemotifs/config.py | 288 | A 3 hrs | C 76% |
| gimmemotifs/tools/motifsampler.py | 150 | A 0 mins | C 76% |
| gimmemotifs/motif/prediction.py | 273 | A 25 mins | C 79% |
| gimmemotifs/tools/motifprogram.py | 104 | A 0 mins | C 79% |
| gimmemotifs/commands/motifs.py | 246 | C 7 hrs | B 82% |
| gimmemotifs/preprocessing.py | 251 | A 45 mins | B 83% |
| gimmemotifs/motif/read.py | 290 | A 2 hrs | B 89% |
| gimmemotifs/scanner/base.py | 576 | D 1 day | B 89% |
| gimmemotifs/commands/cluster.py | 88 | A 0 mins | A 90% |
| gimmemotifs/cli.py | 706 | B 6 hrs | A 90% |
| gimmemotifs/motif/cluster.py | 281 | C 7 hrs | A 90% |