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Ipuch/bioNC

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bionc/utils/heatmap_helpers.py

Summary

Maintainability
A
1 hr
Test Coverage

Function _compute_confidence_value_for_one_heatmap has 5 arguments (exceeds 4 allowed). Consider refactoring.
Open

def _compute_confidence_value_for_one_heatmap(
Severity: Minor
Found in bionc/utils/heatmap_helpers.py - About 35 mins to fix

Function check_format_experimental_heatmaps has a Cognitive Complexity of 7 (exceeds 5 allowed). Consider refactoring.
Open

def check_format_experimental_heatmaps(experimental_heatmaps: dict):
    """
    Checks that the experimental heatmaps are correctly formatted

    Parameters
Severity: Minor
Found in bionc/utils/heatmap_helpers.py - About 35 mins to fix

Cognitive Complexity

Cognitive Complexity is a measure of how difficult a unit of code is to intuitively understand. Unlike Cyclomatic Complexity, which determines how difficult your code will be to test, Cognitive Complexity tells you how difficult your code will be to read and comprehend.

A method's cognitive complexity is based on a few simple rules:

  • Code is not considered more complex when it uses shorthand that the language provides for collapsing multiple statements into one
  • Code is considered more complex for each "break in the linear flow of the code"
  • Code is considered more complex when "flow breaking structures are nested"

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