| docs/protein_localization/Gram_Negative_WO_Outer_Membrane/WP_012242037.1.json | |
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| docs/protein_localization/Gram_Negative_WO_Outer_Membrane/WP_041633705.1.json | |
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| docs/protein_localization/Gram_Negative_WO_Outer_Membrane/WP_041633707.1.json | |
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| docs/protein_localization/Gram_Negative_WO_Outer_Membrane/WP_081423625.1.json | |
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| docs/protein_localization/NP_219504.1_ a.json | |
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| docs/protein_localization/NP_219511.1_ D.json | |
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| docs/references.bib | |
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| docs/references.rst | |
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| docs/requirements.rtd.txt | |
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| docs/requirements.txt | |
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| docs/tutorial.rst | |
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| pytest.ini | |
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| requirements.txt | |
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| scripts/docker-machine | |
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| scripts/mongodump.sh | |
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| scripts/mongorestore.sh | |
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| scripts/mongorestore_aws.sh | |
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| setup.cfg | |
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| datanator/data_source/brenda/core.py | 365 | F 3 days |
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| datanator/data_source/brenda/kinetic_constants.py | 20 |
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| datanator/data_source/protein_half_lives/victoria_parse_column_k0_mouse_brain.py | 289 | F 1 wk |
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| datanator/data_source/protein_half_lives/victoria_parse_mouse_global_quantification.py | 296 | F 1 wk |
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| datanator/data_source/protein_half_lives/victoria_parse_proteome_half_lives.py | 354 | F 1 wk |
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| datanator/data_source/protein_half_lives/victoria_parse_quantification_budding_yeast_proteome.py | 162 | D 3 days |
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| datanator/data_source/protein_half_lives/victoria_parse_yeast_global_proteome_turnover.py | 316 | F 1 wk |
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| datanator/data_source/protein_localization/database_demo.py | 37 | A 35 mins |
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| datanator/data_source/protein_localization/experimental.py | 53 | B 4 hrs |
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| datanator/data_source/protein_localization/justin_10.1038_msb.2011.38.py | 149 | A 1 hr |
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| datanator/data_source/protein_localization/justin_parseGramPositiveJSONSchema.py | 47 | B 6 hrs |
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| datanator/data_source/protein_localization/justin_parse_subcellular_location.py | 97 | C 7 hrs |
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| datanator/data_source/protein_localization/parse_psortdb_experimental.py | 80 | D 2 days |
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| datanator/data_source/protein_localization/parse_psortdb_negative_wo_outer_membrane.py | 57 | C 1 day |
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| datanator/data_source/protein_localization/victoria_insert_archaea.py | 141 | F 2 wks |
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| datanator/data_source/protein_localization/victoria_insert_experimental_protein.py | 168 | D 3 days |
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| datanator/data_source/protein_localization/victoria_insert_neg_wo_outer_membrane.py | 138 | F 2 wks |
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| datanator/data_source/protein_localization/victoria_insert_protein_atlas.py | 247 | F 6 days |
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| datanator/data_source/protein_modification/10_1093_nar_gkw1075.py | 68 | A 2 hrs |
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| datanator/data_source/protein_modification/pro.py | 605 | F 1 wk |
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| datanator/data_source/rna_halflife/back_fill_gene_name.py | 18 | A 3 hrs |
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| datanator/data_source/rna_halflife/doi_10_1016_j_cell_2013_12_026.py | 87 | C 1 day |
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| datanator/data_source/rna_halflife/doi_10_1091_mbc_e11_01_0028.py | 97 | B 5 hrs |
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| datanator/data_source/rna_localization/victoria_parse_LncAtlas.py | 223 | F 3 days |
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| datanator/data_source/rna_modification/rna_modification.py | 92 | B 6 hrs |
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| docs/conf.py | 104 |
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| scripts/quilt_backup.py | 15 |
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| setup.py | 57 |
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